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L2_013_000G1_scaffold_6091

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_6091_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..543
DNA (543bp) protein (181aa)
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein n=2 Tax=Clostridium perfringens PF8_CLOPF">RepID=B1RPF8_CLOPF
solute-binding family 5 protein
Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein {ECO:0000313|EMBL:EDT15986.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_000G1_scaffold_6091_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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618..1583
DNA (966bp) protein (322aa)
Oligopeptide/dipeptide ABC transporter, permease protein n=9 Tax=Clostridium perfringens RepID=Q0TN46_CLOP1
appB; oligopeptide ABC transporter
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EDT15936.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_000G1_scaffold_6091_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1598..2512
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUU5_CLOPF
appC; oligopeptide ABC transporter
ABC transporter, permease protein {ECO:0000313|EMBL:ABG87759.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_013_000G1_scaffold_6091_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2526..3503
DNA (978bp) protein (326aa)
Oligopeptide ABC transporter ATPase n=8 Tax=Clostridium perfringens RepID=H7CYX3_CLOPF
oligopeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15977.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_013_000G1_scaffold_6091_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3504..4472
DNA (969bp) protein (323aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=3 Tax=Clostridium perfringens RepID=H7CYX2_CLOPF
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT22907.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L2_013_000G1_scaffold_6091_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4675..4884
DNA (210bp) protein (70aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CYX1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27449.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_013_000G1_scaffold_6091_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4914..6266
DNA (1353bp) protein (451aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glucose-6-phosphate isomerase n=7 Tax=Clostridium perfringens RepID=G6PI_CLOP1
L2_013_000G1_scaffold_6091_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6464..6913
DNA (450bp) protein (150aa)
UPF0178 protein AC7_2570 n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPG5_CLOPF
UPF0178 protein AC5_2657 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_013_000G1_scaffold_6091_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7286..9202
DNA (1917bp) protein (639aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUT9_CLOPF
Triple tyrosine motif-containing protein {ECO:0000313|EMBL:EIA16034.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
triple tyrosine motif-containing protein
L2_013_000G1_scaffold_6091_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9430..10149
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Pseudouridine synthase n=7 Tax=Clostridium perfringens RepID=H7CYW7_CLOPF
16S pseudouridylate synthase
L2_013_000G1_scaffold_6091_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10703..10954
DNA (252bp) protein (84aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUT7_CLOPF
anchor protein
Anchor protein {ECO:0000313|EMBL:EIA16032.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_000G1_scaffold_6091_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11207..11755
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYW5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16031.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_013_000G1_scaffold_6091_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11772..12119
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REY2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81967.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_013_000G1_scaffold_6091_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12121..12429
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQR9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15954.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_013_000G1_scaffold_6091_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12641..14896
DNA (2256bp) protein (752aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3A6_CLOPF
ATP-dependent DNA helicase PcrA
L2_013_000G1_scaffold_6091_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14934..16667
DNA (1734bp) protein (578aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPE6_CLOPF
Displaying 16 items

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