ggKbase home page

L2_013_000G1_scaffold_2110

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2110_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..643
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX69_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG99514.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2110_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

730..1095
DNA (366bp) protein (122aa)
Gluconate kinase n=16 Tax=Bifidobacterium RepID=B3DP00_BIFLD
gntK2; gntk2
Gluconate kinase {ECO:0000313|EMBL:KEY24030.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_013_000G1_scaffold_2110_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1354..2667)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B7GSI4_BIFLS
ATPase AAA
Putative AAA+ superfamily ATPase {ECO:0000313|EMBL:ACD98856.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_013_000G1_scaffold_2110_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2902..3381)
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage n=18 Tax=Bifidobacterium RepID=B3DNZ6_BIFLD
dps; dps
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:CBK71331.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_013_000G1_scaffold_2110_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3544..4887)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A2C3_BIFBR
Hypothetical membrane spanning protein with duf21 and CBS domains
Hypothetical membrane spanning protein with duf21 and CBS domains {ECO:0000313|EMBL:AHJ20278.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_013_000G1_scaffold_2110_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4924..5667
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX74_BIFLJ
Putative ATPase (AAA superfamily) {ECO:0000313|EMBL:KFI70950.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_2110_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5852..7348)
DNA (1497bp) protein (499aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI70949.1}; EC=3.6.3.30 {ECO:0000313|EMBL:KFI70949.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX75_BIFLJ
ABC transporter ATP-binding protein
L2_013_000G1_scaffold_2110_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7467..7814)
DNA (348bp) protein (116aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX75_BIFLJ
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ADG99521.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2110_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8604..9287)
DNA (684bp) protein (228aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Carbonic anhydrase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX76_BIFLJ
carbonic anhydrase
L2_013_000G1_scaffold_2110_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9493..10056
DNA (564bp) protein (188aa)
Peroxiredoxin {ECO:0000313|EMBL:CBK71328.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CBK71328.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Peroxiredoxin n=4 Tax=Bifidobacterium longum RepID=D6DAX5_BIFLN
alkyl hydroperoxide reductase
L2_013_000G1_scaffold_2110_11
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10225..12123
DNA (1899bp) protein (633aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KFI91710.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KFI91710.1};; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSJ0_BIFLS
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L2_013_000G1_scaffold_2110_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12171..13457)
DNA (1287bp) protein (429aa)
Major facilitator superfamily MFS_1 n=2 Tax=Bifidobacterium longum RepID=D6ZX79_BIFLJ
putative transport protein
MFS transporter {ECO:0000313|EMBL:KEY32360.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_013_000G1_scaffold_2110_13
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13638..13940)
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=B3DNZ0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI91708.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
L2_013_000G1_scaffold_2110_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14011..15009
DNA (999bp) protein (333aa)
Transcriptional regulator, LacI family n=5 Tax=Bifidobacterium longum RepID=C2GXZ2_BIFLN
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY24021.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
transcriptional regulator
L2_013_000G1_scaffold_2110_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15224..16873
DNA (1650bp) protein (550aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G6M9_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN24433.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
transcriptional regulator
L2_013_000G1_scaffold_2110_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17040..19793)
DNA (2754bp) protein (918aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Phosphoenolpyruvate carboxylase-like protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ARB4_BIFLN
ppc; ppc
L2_013_000G1_scaffold_2110_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20079..21992
DNA (1914bp) protein (638aa)
PF12821 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B560_BIFLN
PF12821 family protein {ECO:0000313|EMBL:EIJ26686.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L2_013_000G1_scaffold_2110_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22215..23876
DNA (1662bp) protein (554aa)
Na+/proline symporter n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DNY2_BIFLD
Na+/proline symporter {ECO:0000313|EMBL:KFI70942.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
putP; Na+/proline symporter
L2_013_000G1_scaffold_2110_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24206..25192)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DNY1_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI70941.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_2110_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25446..27065
DNA (1620bp) protein (540aa)
Amidohydrolase 3 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX87_BIFLJ
Amidohydrolase 3 {ECO:0000313|EMBL:ADG99533.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
amidohydrolase 3
L2_013_000G1_scaffold_2110_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27457..28548)
DNA (1092bp) protein (364aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KFI70939.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KFI70939.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Tryptophanyl-tRNA synthetase n=20 Tax=Bifidobacterium RepID=B3DNX9_BIFLD
tryptophanyl-tRNA synthetase
L2_013_000G1_scaffold_2110_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28682..29083
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX89_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI70938.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_2110_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29098..29769
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX90_BIFLJ
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADG99536.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2110_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29948..30988
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX91_BIFLJ
histidine kinase
Uncharacterized protein {ECO:0000313|EMBL:ADG99537.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2110_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31156..32553
DNA (1398bp) protein (466aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSM0_BIFLS
hypothetical protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACJ51198.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_013_000G1_scaffold_2110_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32586..32855)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSM1_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51199.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_013_000G1_scaffold_2110_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33023..35470
DNA (2448bp) protein (816aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Phosphorylase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSM2_BIFLS
glycogen phosphorylase
L2_013_000G1_scaffold_2110_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35740..35958)
DNA (219bp) protein (73aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DNX5_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI98419.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_013_000G1_scaffold_2110_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36156..36908
DNA (753bp) protein (251aa)
Rhomboid family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX96_BIFLJ
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ADG99542.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2110_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37557..38027)
DNA (471bp) protein (157aa)
Cell division protein CrgA n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX97_BIFLJ
septation inhibitor protein
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Displaying items 1-30 of 42 in total

View Taxonomy