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L2_013_000G1_scaffold_2181

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2181_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..228)
DNA (228bp) protein (76aa)
Chaperone protein DnaJ n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LB56_9FIRM
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L2_013_000G1_scaffold_2181_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(245..2086)
DNA (1842bp) protein (614aa)
Chaperone protein DnaK n=3 Tax=Veillonella RepID=T0T2P1_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
chaperone protein DnaK
L2_013_000G1_scaffold_2181_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2114..2485)
DNA (372bp) protein (124aa)
UPI0003D6404E related cluster n=1 Tax=unknown RepID=UPI0003D6404E
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
GrpE protein HSP-70 cofactor
L2_013_000G1_scaffold_2181_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2485..3396)
DNA (912bp) protein (304aa)
Heat-inducible transcription repressor hrcA n=3 Tax=Veillonella RepID=T0U6P2_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
heat-inducible transcription repressor HrcA
L2_013_000G1_scaffold_2181_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3732..4334)
DNA (603bp) protein (201aa)
UPI0003D5CFC0 related cluster n=1 Tax=unknown RepID=UPI0003D5CFC0
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ETI97794.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
nitrite and sulfite reductase 4Fe-4S domain-containing protein
L2_013_000G1_scaffold_2181_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4416..5600)
DNA (1185bp) protein (395aa)
UPI0003D698B6 related cluster n=1 Tax=unknown RepID=UPI0003D698B6
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ETI97795.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
oxygen-independent coproporphyrinogen III oxidase
L2_013_000G1_scaffold_2181_7
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5605..7404)
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Elongation factor 4 n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KMT4_9FIRM
GTP-binding protein LepA
L2_013_000G1_scaffold_2181_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7443..9686)
DNA (2244bp) protein (748aa)
Aluminum resistance protein n=3 Tax=Veillonella RepID=D1YR39_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:EFB85062.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
aluminum resistance protein
L2_013_000G1_scaffold_2181_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9683..10612)
DNA (930bp) protein (310aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
tRNA dimethylallyltransferase n=2 Tax=Veillonella RepID=D6KMT1_9FIRM
tRNA delta(2)-isopentenylpyrophosphate transferase
L2_013_000G1_scaffold_2181_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10609..11421)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T320_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC65552.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
hypothetical protein
L2_013_000G1_scaffold_2181_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11423..13462)
DNA (2040bp) protein (680aa)
DNA mismatch repair protein MutL n=2 Tax=Veillonella parvula RepID=T0T2N2_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
DNA mismatch repair protein MutL
L2_013_000G1_scaffold_2181_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13462..16095)
DNA (2634bp) protein (878aa)
DNA mismatch repair protein MutS n=1 Tax=Veillonella parvula HSIVP1 RepID=T0SVU1_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
DNA mismatch repair protein MutS
L2_013_000G1_scaffold_2181_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16122..16967)
DNA (846bp) protein (282aa)
UPI0003D6408D related cluster n=1 Tax=unknown RepID=UPI0003D6408D
O-methyltransferase protein {ECO:0000313|EMBL:ETI97803.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
O-methyltransferase domain-containing protein
L2_013_000G1_scaffold_2181_14
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17151..18464)
DNA (1314bp) protein (438aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=3 Tax=Veillonella RepID=D6KHL7_9FIRM
MiaB family RNA modification protein
L2_013_000G1_scaffold_2181_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18473..19348)
DNA (876bp) protein (292aa)
Uncharacterized protein n=6 Tax=Veillonella RepID=D1BME2_VEIPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGL78035.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L2_013_000G1_scaffold_2181_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19364..20191)
DNA (828bp) protein (276aa)
PHP domain protein {ECO:0000313|EMBL:EFB85054.1}; EC=3.1.3.- {ECO:0000313|EMBL:EFB85054.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
PHP domain protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KMS4_9FIRM
PHP domain-containing protein
L2_013_000G1_scaffold_2181_17
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20308..22026)
DNA (1719bp) protein (573aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Proline--tRNA ligase n=2 Tax=Veillonella RepID=D6KHL4_9FIRM
prolyl-tRNA synthetase
L2_013_000G1_scaffold_2181_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22020..23105)
DNA (1086bp) protein (362aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=6 Tax=Veillonella RepID=D1BMD9_VEIPT
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_013_000G1_scaffold_2181_19
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23124..24140)
DNA (1017bp) protein (339aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
RIP metalloprotease RseP n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHL2_9FIRM
membrane-associated zinc metalloprotease
L2_013_000G1_scaffold_2181_20
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24149..25294)
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHL1_9FIRM
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_013_000G1_scaffold_2181_21
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25313..26137)
DNA (825bp) protein (275aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Phosphatidate cytidylyltransferase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHL0_9FIRM
phosphatidate cytidylyltransferase
L2_013_000G1_scaffold_2181_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26141..26905)
DNA (765bp) protein (255aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
Isoprenyl transferase n=2 Tax=Veillonella RepID=D1BMD5_VEIPT
UDP diphosphate synthase
L2_013_000G1_scaffold_2181_23
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26886..27137)
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1BMD4_VEIPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23605.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L2_013_000G1_scaffold_2181_24
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27137..27697)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=2 Tax=Veillonella RepID=D1BMD3_VEIPT
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L2_013_000G1_scaffold_2181_25
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27703..28428)
DNA (726bp) protein (242aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Uridylate kinase n=2 Tax=Veillonella RepID=D1BMD2_VEIPT
uridylate kinase
L2_013_000G1_scaffold_2181_26
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28491..28583)
DNA (93bp) protein (31aa)
Elongation factor Ts n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCU2_9FIRM
translation elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Displaying 26 items

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