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L2_013_000G1_scaffold_2414

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2414_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108..755)
DNA (648bp) protein (216aa)
Hydrolyase {ECO:0000313|EMBL:KFI69726.1}; EC=3.1.3.68 {ECO:0000313|EMBL:KFI69726.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Possible hydrolyase with Pf00702 domain n=4 Tax=Bifidobacterium longum RepID=Q8G5H0_BIFLO
hydrolyase
L2_013_000G1_scaffold_2414_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(752..2554)
DNA (1803bp) protein (601aa)
DNA repair protein RecN n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G5G9_BIFLO
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
recN; DNA repair protein RecN
L2_013_000G1_scaffold_2414_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2554..3576)
DNA (1023bp) protein (341aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Bifidobacterium longum RepID=E8MHJ6_BIFL2
kinase
L2_013_000G1_scaffold_2414_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3879..4790
DNA (912bp) protein (304aa)
Trk-type K+ transport systems membrane component n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTC6_BIFLJ
potassium transporter Trk
Trk-type K+ transport systems membrane component {ECO:0000313|EMBL:ADH00132.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2414_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4787..5083
DNA (297bp) protein (99aa)
Cation transport protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATM1_BIFLN
cation transport protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96047.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_013_000G1_scaffold_2414_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5134..5841
DNA (708bp) protein (236aa)
TrkA n=12 Tax=Bifidobacterium RepID=E4QZJ4_BIFLM
trkA; trka
Potassium transporter {ECO:0000313|EMBL:AIW44633.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_013_000G1_scaffold_2414_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5931..6605
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTC4_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH00130.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2414_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6587..7360)
DNA (774bp) protein (258aa)
Hemolysin A {ECO:0000313|EMBL:KFI69720.1}; EC=2.1.1.226 {ECO:0000313|EMBL:KFI69720.1};; EC=2.1.1.227 {ECO:0000313|EMBL:KFI69720.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Hemolysin A n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTC3_BIFLJ
hemolysin A
L2_013_000G1_scaffold_2414_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7466..7612)
DNA (147bp) protein (49aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSX6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32166.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_013_000G1_scaffold_2414_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7617..8657)
DNA (1041bp) protein (347aa)
HAD-superfamily hydrolase {ECO:0000313|EMBL:KFI69718.1}; EC=3.1.3.18 {ECO:0000313|EMBL:KFI69718.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
HAD-superfamily hydrolase, subfamily IIA n=2 Tax=Bifidobacterium longum RepID=D6ZTC1_BIFLJ
hypothetical protein
L2_013_000G1_scaffold_2414_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8666..10375)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G5G2_BIFLO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70730.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_013_000G1_scaffold_2414_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10403..11725)
DNA (1323bp) protein (441aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Tyrosine--tRNA ligase n=16 Tax=Bifidobacterium RepID=SYY_BIFLD
tyrS; tyrs
L2_013_000G1_scaffold_2414_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11851..12618)
DNA (768bp) protein (256aa)
Hypothetical membrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTB8_BIFLJ
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:ADH00124.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_2414_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12615..13148)
DNA (534bp) protein (178aa)
Metal dependent phosphohydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTN4_BIFLS
hypothetical protein
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACJ52943.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_013_000G1_scaffold_2414_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13306..13662)
DNA (357bp) protein (119aa)
Rhodanese domain-containing protein {ECO:0000313|EMBL:KFI69713.1}; EC=2.8.1.1 {ECO:0000313|EMBL:KFI69713.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Rhodanese domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTN5_BIFLS
hypothetical protein
L2_013_000G1_scaffold_2414_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13719..14528)
DNA (810bp) protein (270aa)
Molybdopterin biosynthesis protein MoeB {ECO:0000313|EMBL:KFI69712.1}; EC=2.8.1.11 {ECO:0000313|EMBL:KFI69712.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUE8_BIFLN
thiazole biosynthesis adenylyltransferase ThiF
L2_013_000G1_scaffold_2414_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14605..15474)
DNA (870bp) protein (290aa)
Thiazole synthase n=3 Tax=Bifidobacterium longum RepID=B7GTN7_BIFLS
thiazole synthase
Thiazole biosynthesis family protein {ECO:0000313|EMBL:ACJ52946.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_013_000G1_scaffold_2414_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15486..15680)
DNA (195bp) protein (65aa)
Sulfur transfer protein for thiamine biosynthesis n=20 Tax=Bifidobacterium RepID=B3DSY5_BIFLD
hypothetical protein
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:ACJ52947.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_013_000G1_scaffold_2414_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16029..17501)
DNA (1473bp) protein (491aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Argininosuccinate lyase n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZTB2_BIFLJ
argininosuccinate lyase
L2_013_000G1_scaffold_2414_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17677..18678)
DNA (1002bp) protein (334aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Argininosuccinate synthase n=6 Tax=Bifidobacterium longum RepID=D6ZTB1_BIFLJ
argininosuccinate synthase
Displaying 20 items

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