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L2_013_000G1_scaffold_2462

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2462_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1176)
DNA (1176bp) protein (392aa)
Putative AAA+ superfamily ATPase n=2 Tax=Bifidobacterium longum RepID=E4R2I2_BIFLM
Aaa superfamily atpase {ECO:0000313|EMBL:KFI70176.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
aaa+ superfamily atpase
L2_013_000G1_scaffold_2462_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1640..2410)
DNA (771bp) protein (257aa)
Cobalt ABC transporter ATPase {ECO:0000313|EMBL:KFI70175.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI70175.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
cobalt ABC transporter ATPase n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=UPI0001A365BA
cobalt ABC transporter ATPase
L2_013_000G1_scaffold_2462_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2439..3230)
DNA (792bp) protein (264aa)
Cobalt transport protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9G5_9ACTN
Cobalt ABC transporter permease CbiQ {ECO:0000313|EMBL:KFI70174.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
cobalt ABC transporter permease CbiQ
L2_013_000G1_scaffold_2462_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3245..4318)
DNA (1074bp) protein (358aa)
ABC-type Co2+ transport system, permease component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBM6_9CLOT
Cobalt transport protein CbiM {ECO:0000313|EMBL:KFI70173.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
cobalt transport protein CbiM
L2_013_000G1_scaffold_2462_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4617..5420
DNA (804bp) protein (268aa)
Urease accessory protein UreE n=1 Tax=Bifidobacterium longum subsp. infantis RepID=D5LKC5_BIFLI
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
UreE urease accessory domain-containing protein
L2_013_000G1_scaffold_2462_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5428..6309
DNA (882bp) protein (294aa)
Urease accessory protein UreF n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT19_BIFLS
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
urease accessory protein UreF
L2_013_000G1_scaffold_2462_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6399..7007
DNA (609bp) protein (203aa)
Urease accessory protein UreG n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT20_BIFLS
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
urease accessory protein UreG
L2_013_000G1_scaffold_2462_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7125..8105
DNA (981bp) protein (327aa)
Urease accessory protein UreD n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT21_BIFLS
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Urease accessory protein UreD
L2_013_000G1_scaffold_2462_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8147..9868)
DNA (1722bp) protein (574aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ureC; urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT17_BIFLS
L2_013_000G1_scaffold_2462_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9996..10676)
DNA (681bp) protein (227aa)
Urease {ECO:0000256|SAAS:SAAS00108089}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108089};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
bifunctional urease subunit gamma/beta (EC:3.5.1.5)
Urease gamma subunit n=1 Tax=Bifidobacterium longum subsp. infantis RepID=D5LKC3_BIFLI
L2_013_000G1_scaffold_2462_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10809..11510)
DNA (702bp) protein (234aa)
ABC transporter {ECO:0000313|EMBL:KFI70166.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI70166.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter ATP-binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT14_BIFLS
urea ABC transporter ATP-binding protein
L2_013_000G1_scaffold_2462_12
unknown

Not on your lists

comp(11513..11626)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_013_000G1_scaffold_2462_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11803..12729)
DNA (927bp) protein (309aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI70165.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KFI70165.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter ATP-binding component n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMW5_BIFLS
urea ABC transporter ATP-binding protein
L2_013_000G1_scaffold_2462_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12744..13901)
DNA (1158bp) protein (386aa)
ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ7_BIFLS
Inner-membrane translocator {ECO:0000313|EMBL:KFI70164.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
urea ABC transporter permease
L2_013_000G1_scaffold_2462_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13929..14813)
DNA (885bp) protein (295aa)
ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ6_BIFLS
Inner-membrane translocator {ECO:0000313|EMBL:KFI70163.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter permease
L2_013_000G1_scaffold_2462_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14833..16128)
DNA (1296bp) protein (432aa)
Extracellular ligand-binding receptor n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ5_BIFLS
ABC transporter substrate binding component {ECO:0000313|EMBL:KFI70162.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ABC transporter substrate-binding protein
L2_013_000G1_scaffold_2462_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16467..17108
DNA (642bp) protein (214aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Uracil phosphoribosyltransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQ97_BIFBR
L2_013_000G1_scaffold_2462_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17156..17635
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Ribosomal RNA large subunit methyltransferase H n=4 Tax=Bifidobacterium breve RepID=F6C8E4_BIFBA
Hypothetical protein
L2_013_000G1_scaffold_2462_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17812..18366)
DNA (555bp) protein (185aa)
glycerophosphodiester phosphodiesterase n=1 Tax=Bifidobacterium longum RepID=UPI00003935D2
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KFI70159.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glycerophosphoryl diester phosphodiesterase
Displaying 19 items

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