ggKbase home page

L2_013_000G1_scaffold_2903

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2903_1
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..874
DNA (873bp) protein (291aa)
Chaperone protein DnaJ n=5 Tax=Veillonella RepID=T0T330_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
chaperone protein DnaJ
L2_013_000G1_scaffold_2903_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

938..1801
DNA (864bp) protein (288aa)
UPI0003D5D580 related cluster n=1 Tax=unknown RepID=UPI0003D5D580
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:ETI97789.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ribosomal L11 methyltransferase
L2_013_000G1_scaffold_2903_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1798..2529
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D67B18 related cluster n=1 Tax=unknown RepID=UPI0003D67B18
hypothetical protein
L2_013_000G1_scaffold_2903_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2554..3849
DNA (1296bp) protein (432aa)
tRNA methylthiotransferase YqeV n=4 Tax=Veillonella RepID=D1YR50_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EGL78003.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
MiaB-like tRNA modifying enzyme
L2_013_000G1_scaffold_2903_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3861..4205
DNA (345bp) protein (115aa)
Histidine triad domain protein n=4 Tax=Veillonella RepID=D1YR51_9FIRM
HIT domain protein {ECO:0000313|EMBL:EFG25421.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
histidine triad (HIT) protein
L2_013_000G1_scaffold_2903_6
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4305..4790
DNA (486bp) protein (162aa)
Transamidase GatB domain protein n=5 Tax=Veillonella RepID=T0UEG9_9FIRM
YqeY-like protein {ECO:0000313|EMBL:ETI97784.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L2_013_000G1_scaffold_2903_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5027..6931
DNA (1905bp) protein (635aa)
Glutamine synthetase, clostridia type n=3 Tax=Veillonella parvula RepID=T0U6Q3_9FIRM
Glutamate-ammonia ligase, catalytic protein {ECO:0000313|EMBL:ETI97783.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
glutamine synthetase
L2_013_000G1_scaffold_2903_8
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7037..7432)
DNA (396bp) protein (132aa)
Phosphate-starvation-inducible protein PsiE n=4 Tax=Veillonella RepID=T0SVW0_9FIRM
Protein PsiE {ECO:0000313|EMBL:ETI97782.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
phosphate-starvation-inducible E
L2_013_000G1_scaffold_2903_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7540..8055)
DNA (516bp) protein (172aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Probable thiol peroxidase n=4 Tax=Veillonella RepID=T0T2Q2_9FIRM
redoxin
L2_013_000G1_scaffold_2903_10
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8467..10194
DNA (1728bp) protein (576aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=T0T340_9FIRM
Putative ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EFG23638.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
ABC transporter
L2_013_000G1_scaffold_2903_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10181..11926
DNA (1746bp) protein (582aa)
ABC transporter n=4 Tax=Veillonella RepID=T0UEH5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGL77783.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
ABC transporter
L2_013_000G1_scaffold_2903_12
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11928..12722
DNA (795bp) protein (265aa)
RNA methyltransferase, TrmH family n=3 Tax=Veillonella RepID=D1YR59_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFG23640.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
tRNA/rRNA methyltransferase SpoU
L2_013_000G1_scaffold_2903_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12882..13736
DNA (855bp) protein (285aa)
Cellobiose phosphotransferase system YdjC-like protein n=5 Tax=Veillonella RepID=T0SVX7_9FIRM
Putative hopanoid biosynthesis associated protein HpnK {ECO:0000313|EMBL:EGL77906.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
L2_013_000G1_scaffold_2903_14
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13733..14725
DNA (993bp) protein (331aa)
Integral membrane protein n=5 Tax=Veillonella RepID=T0T2X6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23642.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
hypothetical protein
L2_013_000G1_scaffold_2903_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14739..15188
DNA (450bp) protein (150aa)
UPF0735 ACT domain-containing protein Vpar_0898 n=5 Tax=Veillonella RepID=D1BMH2_VEIPT
amino acid-binding ACT protein
UPF0735 ACT domain-containing protein HMPREF1035_1511 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
L2_013_000G1_scaffold_2903_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15213..16502
DNA (1290bp) protein (430aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Homoserine dehydrogenase n=5 Tax=Veillonella RepID=T0UEI9_9FIRM
homoserine dehydrogenase
L2_013_000G1_scaffold_2903_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16505..17419
DNA (915bp) protein (305aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Homoserine kinase n=3 Tax=Veillonella RepID=D1YR64_9FIRM
homoserine kinase
L2_013_000G1_scaffold_2903_18
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17475..18350
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Protease HtpX homolog n=5 Tax=Veillonella RepID=T0SW64_9FIRM
peptidase M48 Ste24p
L2_013_000G1_scaffold_2903_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18373..18780
DNA (408bp) protein (136aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Nucleoside diphosphate kinase n=3 Tax=Veillonella parvula RepID=T0T366_9FIRM
nucleoside diphosphate kinase
L2_013_000G1_scaffold_2903_20
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18845..19360
DNA (516bp) protein (172aa)
Cob(I)alamin adenosyltransferase PduO n=5 Tax=Veillonella RepID=T0T3I0_9FIRM
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EFG23648.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
ATP/cobalamin adenosyltransferase
L2_013_000G1_scaffold_2903_21
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19407..19742)
DNA (336bp) protein (112aa)
Uncharacterized protein n=6 Tax=Veillonella RepID=D1BMH8_VEIPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23649.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L2_013_000G1_scaffold_2903_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19882..20178
DNA (297bp) protein (99aa)
Adenosylcobinamide-phosphateguanylyltransferase {ECO:0000313|EMBL:EQC65584.1}; EC=2.7.7.62 {ECO:0000313|EMBL:EQC65584.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Adenosylcobinamide-phosphateguanylyltransferase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0U6T1_9FIRM
cobalbumin biosynthesis protein
L2_013_000G1_scaffold_2903_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20171..21688
DNA (1518bp) protein (506aa)
Cobyric acid synthase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KYJ9_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
cobyric acid synthase CobQ
L2_013_000G1_scaffold_2903_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21701..22693
DNA (993bp) protein (331aa)
Cobalamin biosynthesis protein CobD n=2 Tax=Veillonella parvula RepID=T0T370_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
cobalamin biosynthesis protein CobD
L2_013_000G1_scaffold_2903_25
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22693..23586
DNA (894bp) protein (298aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Cobalamin synthase n=4 Tax=Veillonella RepID=T0T3I4_9FIRM
cobalamin 5'-phosphate synthase
L2_013_000G1_scaffold_2903_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23660..24544
DNA (885bp) protein (295aa)
Threonine kinase in B12 biosynthesis n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UEJ6_9FIRM
Threonine kinase in B12 biosynthesis {ECO:0000313|EMBL:EQC65588.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
GHMP kinase
L2_013_000G1_scaffold_2903_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24569..25699
DNA (1131bp) protein (377aa)
L-threonine 3-O-phosphate decarboxylase {ECO:0000313|EMBL:EQC65589.1}; EC=4.1.1.81 {ECO:0000313|EMBL:EQC65589.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
L-threonine 3-O-phosphate decarboxylase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0U6T3_9FIRM
class I and II aminotransferase
L2_013_000G1_scaffold_2903_28
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25707..26345
DNA (639bp) protein (213aa)
Phosphoglycerate mutase n=4 Tax=Veillonella RepID=T0SW71_9FIRM
phosphoglycerate mutase
Putative alpha-ribazole phosphatase {ECO:0000313|EMBL:EGL77799.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
L2_013_000G1_scaffold_2903_29
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26345..27043
DNA (699bp) protein (233aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Pseudouridine synthase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHR0_9FIRM
pseudouridine synthase
L2_013_000G1_scaffold_2903_30
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27114..28181
DNA (1068bp) protein (356aa)
Xaa-Pro dipeptidase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHR1_9FIRM
Xaa-Pro dipeptidase {ECO:0000313|EMBL:EFG23658.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
peptidase M24
Displaying 30 items

View Taxonomy