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L2_013_000G1_scaffold_1138

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1138_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(455..955)
DNA (501bp) protein (167aa)
Acetyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV76_BIFLJ
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:KFI68005.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_013_000G1_scaffold_1138_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1051..2928)
DNA (1878bp) protein (626aa)
67 kDa myosin-cross-reactive antigen family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV77_BIFLJ
67 kDa myosin-cross-reactive antigen family protein {ECO:0000313|EMBL:ADH00783.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
67 kDa myosin-cross-reactive antigen family protein
L2_013_000G1_scaffold_1138_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3134..3583)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV78_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI68003.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_1138_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3657..7214)
DNA (3558bp) protein (1186aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
DNA polymerase III, alpha subunit n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV79_BIFLJ
dnaE; DNA polymerase III subunit alpha
L2_013_000G1_scaffold_1138_5

Not on your lists

comp(7249..8115)
DNA (867bp) protein (289aa)
Ribonuclease BN n=1 Tax=uncultured bacterium RepID=S6CPP6_9BACT
Ribonuclease BN {ECO:0000313|EMBL:CCG34827.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ribonuclease BN
L2_013_000G1_scaffold_1138_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8685..9647)
DNA (963bp) protein (321aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Uncharacterized protein n=10 Tax=Bacteria RepID=Q8G7W2_BIFLO
hypothetical protein
L2_013_000G1_scaffold_1138_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9647..10195)
DNA (549bp) protein (183aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Lipoprotein signal peptidase; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; Flags: Precursor;; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Lipoprotein signal peptidase n=2 Tax=Bifidobacterium longum RepID=LSPA_BIFLS
putative lipoprotein signal peptidase
L2_013_000G1_scaffold_1138_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10217..11596)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV83_BIFLJ
dihydrouridine synthase
Uncharacterized protein {ECO:0000313|EMBL:ADH00789.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_1138_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11736..12038)
DNA (303bp) protein (101aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=B7GQ25_BIFLS
Hemolysin-like protein {ECO:0000313|EMBL:KFI67997.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_1138_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12160..12639)
DNA (480bp) protein (160aa)
Cell division protein SepF n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV85_BIFLJ
cell division protein SepF
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_1138_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12652..13863)
DNA (1212bp) protein (404aa)
Cell division protein FtsZ n=8 Tax=Bacteria RepID=E8ME67_BIFL2
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_013_000G1_scaffold_1138_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13975..14460)
DNA (486bp) protein (162aa)
Putative TIM-barrel protein, nifR3 family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV87_BIFLJ
dihydrouridine synthase
tRNA-dihydrouridine synthase {ECO:0000313|EMBL:ACD97581.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_013_000G1_scaffold_1138_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14595..15080)
DNA (486bp) protein (162aa)
Putative TIM-barrel protein {ECO:0000313|EMBL:KFI67994.1}; EC=1.3.1.89 {ECO:0000313|EMBL:KFI67994.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Putative TIM-barrel protein, nifR3 family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV87_BIFLJ
putative TIM-barrel protein
L2_013_000G1_scaffold_1138_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15231..15437)
DNA (207bp) protein (69aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glycine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ21_BIFLS
Glycyl-tRNA synthetase suspected. See adjacent gene [L2_013_000G1_scaffold_1138_15].
glycyl-tRNA synthase
L2_013_000G1_scaffold_1138_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15388..16578)
DNA (1191bp) protein (397aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Glycine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ21_BIFLS
glycyl-tRNA synthase
L2_013_000G1_scaffold_1138_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17013..17825
DNA (813bp) protein (271aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=THIM_BIFLS
L2_013_000G1_scaffold_1138_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17908..20661
DNA (2754bp) protein (918aa)
Phosphomethylpyrimidine synthase {ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|SAAS:SAAS00007809};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
thiamine biosynthesis protein ThiC (EC:2.5.1.3)
Thiamine biosynthesis protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ19_BIFLS
L2_013_000G1_scaffold_1138_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20698..21906)
DNA (1209bp) protein (403aa)
Vesicle-fusing ATPase {ECO:0000313|EMBL:ACJ51898.1}; EC=3.6.4.6 {ECO:0000313|EMBL:ACJ51898.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Putative ATPase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ18_BIFLS
putative ATPase
L2_013_000G1_scaffold_1138_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22024..22842
DNA (819bp) protein (273aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KFI68558.1}; EC=2.5.1.3 {ECO:0000313|EMBL:KFI68558.1};; EC=2.7.1.49 {ECO:0000313|EMBL:KFI68558.1};; EC=2.7.4.7 {ECO:0000313|EMBL:KFI68558.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Phosphomethylpyrimidine kinase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ17_BIFLS
Phosphomethylpyrimidine kinase/Hydroxymethylpyrimidine kinase
L2_013_000G1_scaffold_1138_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22906..23283
DNA (378bp) protein (126aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=F6C888_BIFBA
Conserved hypothetical protein with DUF77 domain
Uncharacterized protein {ECO:0000313|EMBL:KFI68557.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_013_000G1_scaffold_1138_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23789..25168
DNA (1380bp) protein (460aa)
Sugar transporter n=7 Tax=Bifidobacterium RepID=D6ZV95_BIFLJ
Transporter, MFS superfamily
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI88130.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_013_000G1_scaffold_1138_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25178..26590)
DNA (1413bp) protein (471aa)
2CS histidine protein kinase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y230_BIFBU
2CS histidine protein kinase
2CS histidine protein kinase {ECO:0000313|EMBL:AHJ21486.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_013_000G1_scaffold_1138_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26644..27129)
DNA (486bp) protein (162aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV97_BIFLJ
Two-component response regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEF26328.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_013_000G1_scaffold_1138_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27216..28256
DNA (1041bp) protein (347aa)
Transcriptional regulator, LacI family n=6 Tax=Bifidobacterium RepID=F6C882_BIFBA
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AHJ21490.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_013_000G1_scaffold_1138_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28470..29795
DNA (1326bp) protein (442aa)
Galactoside transport protein n=7 Tax=Bifidobacterium RepID=B7GQ11_BIFLS
Sucrose permease
Galactoside permease {ECO:0000313|EMBL:AEF26886.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_013_000G1_scaffold_1138_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29960..31516
DNA (1557bp) protein (519aa)
Beta-fructofuranosidase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ10_BIFLS
Glycosyl hydrolase family 32, N terminal domain protein {ECO:0000313|EMBL:ACJ51890.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
glycosyl hydrolase family protein
L2_013_000G1_scaffold_1138_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31712..32494
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=10 Tax=Bifidobacterium RepID=D6DB86_BIFLN
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIJ26277.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_013_000G1_scaffold_1138_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32753..33823
DNA (1071bp) protein (357aa)
Membrane lipoprotein lipid attachment site n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVA6_BIFLJ
membrane lipoprotein lipid attachment site
Membrane lipoprotein lipid attachment site {ECO:0000313|EMBL:ADH00812.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_1138_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33947..35149
DNA (1203bp) protein (401aa)
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVA7_BIFLJ
nucleoside hydrolase
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:ADH00813.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_1138_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35268..36062)
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Isoprenyl transferase n=16 Tax=Bacteria RepID=ISPT_BIFLO
uppS; undecaprenyl pyrophosphate synthase
Displaying items 1-30 of 69 in total

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