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L2_013_000G1_scaffold_1466

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1466_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..539)
DNA (537bp) protein (179aa)
Peptidase M20 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ4_BIFLS
hypothetical protein
Peptidase M20 {ECO:0000313|EMBL:ACJ52963.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_013_000G1_scaffold_1466_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

631..1254
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT96_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH00102.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_1466_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1402..2892
DNA (1491bp) protein (497aa)
Dihydrolipoamide dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT95_BIFLJ
dihydrolipoamide dehydrogenase
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:ADH00101.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_013_000G1_scaffold_1466_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2976..3758
DNA (783bp) protein (261aa)
Conserved hypothetical transmembrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT94_BIFLJ
Integral membrane protein {ECO:0000313|EMBL:KFI67689.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_1466_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4078..5514
DNA (1437bp) protein (479aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Glutamine synthetase n=2 Tax=Bifidobacterium longum RepID=B7GTQ8_BIFLS
glutamine synthase
L2_013_000G1_scaffold_1466_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5694..6215)
DNA (522bp) protein (174aa)
Putative glycoside hydrolase {ECO:0000313|EMBL:ESV33149.1}; EC=3.2.1.31 {ECO:0000313|EMBL:ESV33149.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Putative glycoside hydrolase n=1 Tax=Bifidobacterium longum E18 RepID=V6Y006_BIFLN
truncated beta-glucuronidase
L2_013_000G1_scaffold_1466_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6303..7391)
DNA (1089bp) protein (363aa)
Permease n=6 Tax=Bifidobacterium RepID=F8ART5_BIFLN
permease
Membrane transporter {ECO:0000313|EMBL:EFV38131.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_013_000G1_scaffold_1466_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7556..7819
DNA (264bp) protein (88aa)
Isoleucine patch superfamily acetyltransferase n=12 Tax=Bifidobacterium RepID=B3DT08_BIFLD
hypothetical protein
Nodulation protein L {ECO:0000313|EMBL:KEY32557.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_013_000G1_scaffold_1466_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7829..8500)
DNA (672bp) protein (224aa)
Galactoside O-acetyltransferase n=12 Tax=Bifidobacterium RepID=D6ZT89_BIFLJ
lacA; galactoside O-acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AIW43514.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_013_000G1_scaffold_1466_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8522..8815
DNA (294bp) protein (98aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=B3DT10_BIFLD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70694.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_013_000G1_scaffold_1466_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8989..9672)
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA lyase n=1 Tax=Bifidobacterium breve RepID=UPI0002F0788B
DNA-(apurinic or apyrimidinic site) lyase, endonuclease III, base excision repair
L2_013_000G1_scaffold_1466_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9689..10993)
DNA (1305bp) protein (435aa)
MATE efflux family protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BN98_BIFBR
Na+ driven multidrug efflux pump, MatE family
MATE efflux family protein {ECO:0000313|EMBL:EFE89135.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_013_000G1_scaffold_1466_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11219..13723)
DNA (2505bp) protein (835aa)
Excinuclease ABC subunit A n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XXR0_BIFBU
Excinuclease ABC subunit A {ECO:0000313|EMBL:KFI67697.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Excinuclease ABC subunit A
L2_013_000G1_scaffold_1466_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14073..15830)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTR6_BIFLS
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KFI67698.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_1466_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16238..17074)
DNA (837bp) protein (279aa)
Putative AAA+ superfamily ATPase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT83_BIFLJ
Putative AAA superfamily ATPase {ECO:0000313|EMBL:KFI67699.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
putative AAA+ superfamily ATPase
L2_013_000G1_scaffold_1466_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17244..17987
DNA (744bp) protein (248aa)
Dioxygenase-like 2-nitropropane dioxygenase n=7 Tax=Bifidobacterium RepID=B3DT17_BIFLD
Dioxygenase {ECO:0000313|EMBL:KEY29401.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_013_000G1_scaffold_1466_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18004..18657
DNA (654bp) protein (218aa)
Possible MarR-type transcriptional regulator n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G5C7_BIFLO
MarR-type transcriptional regulator
MarR-type transcriptional regulator {ECO:0000313|EMBL:KFI67701.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_013_000G1_scaffold_1466_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18847..19005
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4QZN4_BIFLM
AAA domain protein {ECO:0000313|EMBL:KFI67702.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ATPase AAA
L2_013_000G1_scaffold_1466_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19606..20967)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G5C5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24897.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_013_000G1_scaffold_1466_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21198..22241)
DNA (1044bp) protein (348aa)
Alcohol dehydrogenase GroES domain-containing protein {ECO:0000313|EMBL:KFI67706.1}; EC=1.1.1.1 {ECO:0000313|EMBL:KFI67706.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Alcohol dehydrogenase GroES domain protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT72_BIFLJ
tdh1; threonine dehydrogenase
L2_013_000G1_scaffold_1466_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22579..23115
DNA (537bp) protein (179aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRG6_BIFBR
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
camphor resistance CrcB protein
L2_013_000G1_scaffold_1466_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23115..23480
DNA (366bp) protein (122aa)
Putative fluoride ion transporter CrcB 3 n=12 Tax=Bifidobacterium RepID=CRCB3_BIFLO
hypothetical protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_013_000G1_scaffold_1466_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23558..24046
DNA (489bp) protein (163aa)
Hypothetical membrane protein n=2 Tax=Bifidobacterium longum RepID=B3DT24_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97906.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_013_000G1_scaffold_1466_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24131..25195)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N2I6_9BIFI
Membrane protein {ECO:0000313|EMBL:KFI67710.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_013_000G1_scaffold_1466_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25361..26179)
DNA (819bp) protein (273aa)
Transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT67_BIFLJ
LysR family transcriptional regulator {ECO:0000313|EMBL:KEY32539.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
transcriptional regulator
L2_013_000G1_scaffold_1466_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26316..27080)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUJ2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81119.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_013_000G1_scaffold_1466_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27254..27508)
DNA (255bp) protein (85aa)
Elongation factor Tu n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT65_BIFLJ
tuf; translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_013_000G1_scaffold_1466_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27531..28142
DNA (612bp) protein (204aa)
Elongation factor TU (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum RepID=D6QTD4_BIFLN
Elongation factor TU {ECO:0000313|EMBL:ADG46990.1}; Flags: Fragment;; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
Displaying 28 items

View Taxonomy