ggKbase home page

L2_013_000G1_scaffold_1606

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1606_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

722..1963
DNA (1242bp) protein (414aa)
HI0933 family flavoprotein n=1 Tax=Clostridium colicanis 209318 RepID=N9XKM2_9CLOT
flavo, family protein
Flavo, family protein {ECO:0000313|EMBL:AIY83907.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1996..2751)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXA9_9CLOT
acyl-ACP thioesterase family protein
Acyl-ACP thioesterase family protein {ECO:0000313|EMBL:AIY84276.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2849..3373)
DNA (525bp) protein (175aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AIY84636.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3515..3706)
DNA (192bp) protein (64aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZX8_CLOPF
hybrid cluster -associated redox disulfide domain protein
Disulfide oxidoreductase {ECO:0000313|EMBL:KJU71765.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_000G1_scaffold_1606_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3802..5088)
DNA (1287bp) protein (429aa)
purA; adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Adenylosuccinate synthetase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBI2_9CLOT
L2_013_000G1_scaffold_1606_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5617..6417)
DNA (801bp) protein (267aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:AIY83616.1}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000313|EMBL:AIY83616.1};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Pyrroline-5-carboxylate reductase ProC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MY00_CLOSA
L2_013_000G1_scaffold_1606_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6504..7841)
DNA (1338bp) protein (446aa)
dnaB; replicative DNA helicase (EC:3.6.4.12)
Replicative DNA helicase {ECO:0000313|EMBL:AIY85128.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AIY85128.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Replicative DNA helicase n=1 Tax=Clostridium colicanis 209318 RepID=N9XKL7_9CLOT
L2_013_000G1_scaffold_1606_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7969..9861)
DNA (1893bp) protein (631aa)
Lon family ATP-dependent protease n=1 Tax=Clostridium colicanis 209318 RepID=N9XXA4_9CLOT
ATP-dependent protease, Lon family {ECO:0000313|EMBL:AIY84571.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
lonC; ATP-dependent protease, Lon family
L2_013_000G1_scaffold_1606_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9874..10320)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Clostridium colicanis 209318 RepID=N9WB41_9CLOT
rplI; ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10322..12262)
DNA (1941bp) protein (647aa)
DHH family protein n=2 Tax=Clostridium botulinum B RepID=B2TRG3_CLOBB
DHH family protein {ECO:0000313|EMBL:AIY84969.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DHH family protein
L2_013_000G1_scaffold_1606_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12284..12604)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWC9_9CLOT
mazG-like family protein
MazG-like family protein {ECO:0000313|EMBL:KJU71772.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_000G1_scaffold_1606_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12741..12992)
DNA (252bp) protein (84aa)
30S ribosomal protein S18 n=4 Tax=Clostridium botulinum RepID=B2TRG5_CLOBB
rpsR; ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_000G1_scaffold_1606_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13018..13452)
DNA (435bp) protein (145aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXA1_9CLOT
ssb; single-stranded DNA-binding family protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13469..13759)
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIM8_9CLOT
rpsF; ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_000G1_scaffold_1606_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13858..14052)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H930_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83447.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14066..14953)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWC6_9CLOT
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:AIY83360.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14976..15212)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WB36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71778.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L2_013_000G1_scaffold_1606_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15376..16002
DNA (627bp) protein (209aa)
LysE type translocator n=4 Tax=Clostridium butyricum RepID=B1QSP3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJU71779.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
lysE type translocator family protein
L2_013_000G1_scaffold_1606_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16015..17169
DNA (1155bp) protein (385aa)
Cysteine desulfurase n=1 Tax=Clostridium colicanis 209318 RepID=N9WBI2_9CLOT
Cysteine desulfurase {ECO:0000313|EMBL:KJU71780.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
aminotransferase class-V family protein
L2_013_000G1_scaffold_1606_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17226..17807
DNA (582bp) protein (194aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIM6_9CLOT
Sporulation protein {ECO:0000313|EMBL:KJU71781.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
yyaC; putative sporulation protein YyaC
L2_013_000G1_scaffold_1606_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17919..18419)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H929_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71782.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_000G1_scaffold_1606_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18465..19349)
DNA (885bp) protein (295aa)
ParB-like partition protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WB34_9CLOT
spo0J; stage 0 sporulation protein J
Stage 0 sporulation protein J {ECO:0000313|EMBL:AIY83400.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19328..20128)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WBH7_9CLOT
cobQ/CobB/MinD/ParA nucleotide binding domain protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:AIY83729.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20337..21134)
DNA (798bp) protein (266aa)
ParB-like partition protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWB7_9CLOT
noc; nucleoid occlusion protein
Nucleoid occlusion protein {ECO:0000313|EMBL:AIY82577.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21269..21988)
DNA (720bp) protein (240aa)
gidB; 16S rRNA methyltransferase GidB (EC:2.1.1.170)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium colicanis 209318 RepID=N9XKJ4_9CLOT
L2_013_000G1_scaffold_1606_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22008..23900)
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium colicanis 209318 RepID=N9XX80_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
L2_013_000G1_scaffold_1606_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23911..25290)
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium colicanis 209318 RepID=N9WB31_9CLOT
trmE; tRNA modification GTPase TrmE
L2_013_000G1_scaffold_1606_28
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25450..25911)
DNA (462bp) protein (154aa)
Putative R3H domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQ70_9CLOT
putative RNA-binding protein
Putative RNA-binding protein {ECO:0000313|EMBL:AIY82669.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25991..26767)
DNA (777bp) protein (259aa)
YidC/Oxa1 family membrane protein insertase n=1 Tax=Clostridium colicanis 209318 RepID=N9XWA9_9CLOT
yidC; membrane insertase, YidC/Oxa1 family domain protein
Membrane insertase, YidC/Oxa1 family domain protein {ECO:0000313|EMBL:AIY83665.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_013_000G1_scaffold_1606_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26789..26998)
DNA (210bp) protein (70aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXH5_CLOSA
putative membrane protein insertion efficiency factor
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 39 in total

View Taxonomy