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L2_013_000G1_scaffold_2003

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2003_1

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3..566
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKL59395.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
L2_013_000G1_scaffold_2003_2
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1381..3123
DNA (1743bp) protein (581aa)
celH; endoglucanase H (EC:3.2.1.4)
Endoglucanase H {ECO:0000313|EMBL:AFS79156.1}; EC=3.2.1.4 {ECO:0000313|EMBL:AFS79156.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Endoglucanase H n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B3F7_CLOA9
L2_013_000G1_scaffold_2003_3
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3416..5143
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248DD8A
Uncharacterized protein {ECO:0000313|EMBL:KEQ27168.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
L2_013_000G1_scaffold_2003_4
Paenibacillus sp. oral taxon 786, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5574..6692
DNA (1119bp) protein (373aa)
HrcA family transcriptional regulator n=1 Tax=Paenibacillus fonticola RepID=UPI00037BEA4A
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=621372 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. oral taxon 786 str. D14.;"
HrcA family transcriptional regulator
L2_013_000G1_scaffold_2003_5
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6710..7315
DNA (606bp) protein (202aa)
Protein GrpE n=1 Tax=Geobacillus thermoglucosidasius RepID=GRPE_GEOTM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
grpE; heat shock protein GrpE
L2_013_000G1_scaffold_2003_6
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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7366..9213
DNA (1848bp) protein (616aa)
Chaperone protein DnaK n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DNC4_9BACL
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
chaperone protein DnaK
L2_013_000G1_scaffold_2003_7
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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9213..10451
DNA (1239bp) protein (413aa)
Chaperone protein DnaJ n=1 Tax=Thermincola potens (strain JR) RepID=D5XAT4_THEPJ
chaperone protein DnaJ
Tax=BJP_IG2158_Thermincola_46_17
L2_013_000G1_scaffold_2003_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10581..12065
DNA (1485bp) protein (495aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Glycerol kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEN8_9CLOT
glycerol kinase
L2_013_000G1_scaffold_2003_9
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12121..12516)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WEM6_DESOD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET66917.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L2_013_000G1_scaffold_2003_10
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(12540..13886)
DNA (1347bp) protein (449aa)
Predicted membrane protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E8X5_9ACTN
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL04172.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L2_013_000G1_scaffold_2003_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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14584..15042
DNA (459bp) protein (153aa)
Translation initiation factor IF-3 n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LD09_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
translation initiation factor IF-3
L2_013_000G1_scaffold_2003_12
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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15057..15245
DNA (189bp) protein (63aa)
50S ribosomal protein L35 n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W4Z9_DESOD
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
50S ribosomal protein L35
L2_013_000G1_scaffold_2003_13
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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15261..15614
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=1 Tax=Clostridium sp. CAG:349 RepID=R6WY33_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
rplT; 50S ribosomal protein L20
L2_013_000G1_scaffold_2003_14
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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15651..16673
DNA (1023bp) protein (341aa)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WMD8_EGGLE
biotin
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
L2_013_000G1_scaffold_2003_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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16679..17170
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59799.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ywhH; YbaK/prolyl-tRNA synthetase associated domain-containing protein
L2_013_000G1_scaffold_2003_16
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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17167..17661
DNA (495bp) protein (165aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1353 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ACP7_ENTCA
YbaK/EbsC protein
L2_013_000G1_scaffold_2003_17
unknown

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17782..18015
DNA (234bp) protein (78aa)

This feature has no annotations

L2_013_000G1_scaffold_2003_18
Corynebacterium atypicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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18122..18868
DNA (747bp) protein (249aa)
Hypothetical membrane protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EGU9_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG64226.1}; TaxID=191610 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium atypicum.;"
L2_013_000G1_scaffold_2003_19
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19376..19753
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MP91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFC05503.1}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
hypothetical protein
L2_013_000G1_scaffold_2003_20
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19772..20749
DNA (978bp) protein (326aa)
Caspase domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MP90_9FIRM
Caspase domain protein {ECO:0000313|EMBL:EFC05502.1}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
hypothetical protein
L2_013_000G1_scaffold_2003_21
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20761..20928
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MP89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFC05501.1}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
L2_013_000G1_scaffold_2003_22
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20928..21107
DNA (180bp) protein (60aa)
TIR domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UM78_9FIRM
TIR domain protein {ECO:0000313|EMBL:ERT59999.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
hypothetical protein
L2_013_000G1_scaffold_2003_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21695..21853)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Anaerococcus sp. PH9 RepID=UPI0002F92F65
mobilization protein
Uncharacterized protein {ECO:0000313|EMBL:BAG08360.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus).;"
Displaying 23 items

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