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L2_013_000G1_scaffold_2020

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2020_1
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(39..1958)
DNA (1920bp) protein (640aa)
Protein kinase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWT3_HALOH
protein kinase
Protein kinase {ECO:0000313|EMBL:ACL69752.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
L2_013_000G1_scaffold_2020_2
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1943..2692)
DNA (750bp) protein (250aa)
Protein serine/threonine phosphatase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MH90_ALKOO
protein serine/threonine phosphatase
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ABW18977.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L2_013_000G1_scaffold_2020_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3706..4494)
DNA (789bp) protein (263aa)
Phospholipase/carboxylesterase superfamily protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D2Q2_9FIRM
Putative ester hydrolase {ECO:0000313|EMBL:CRH76073.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L2_013_000G1_scaffold_2020_4

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comp(4497..4964)
DNA (468bp) protein (156aa)
spoU2; RNA methyltransferase SpoU (EC:2.1.1.207)
rRNA methylase (SpoU class) (Fragment) n=1 Tax=gut metagenome RepID=J9FDH6_9ZZZZ
rRNA methylase (SpoU class) {ECO:0000313|EMBL:EJW92463.1}; Flags: Fragment;; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L2_013_000G1_scaffold_2020_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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5058..5771
DNA (714bp) protein (238aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
npdA; NAD-dependent deacetylase (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EGP0_9FIRM
L2_013_000G1_scaffold_2020_6
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5847..7100)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6P044_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC03332.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
transglutaminase
L2_013_000G1_scaffold_2020_7
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7212..7604)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFC0_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:KJS23393.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
L2_013_000G1_scaffold_2020_8
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7607..8956)
DNA (1350bp) protein (450aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KX36_CLOB6
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
L2_013_000G1_scaffold_2020_9
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

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comp(8956..10254)
DNA (1299bp) protein (433aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T525_THEA1
glutamate-1-semialdehyde-2,1-aminomutase
L2_013_000G1_scaffold_2020_10
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10251..11237)
DNA (987bp) protein (329aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8G2L9_DESHD
L2_013_000G1_scaffold_2020_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11239..12765)
DNA (1527bp) protein (509aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Thermincola potens (strain JR) RepID=D5XEC9_THEPJ
HemD protein {ECO:0000313|EMBL:KJS22541.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
uroporphyrin-III C-methyltransferase
L2_013_000G1_scaffold_2020_12
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12774..13709)
DNA (936bp) protein (312aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas tunicata D2.;"
Porphobilinogen deaminase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CFD5_9GAMM
hydroxymethylbilane synthase
L2_013_000G1_scaffold_2020_13
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13718..14986)
DNA (1269bp) protein (423aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Glutamyl-tRNA reductase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIY0_DESK7
glutamyl-tRNA reductase
L2_013_000G1_scaffold_2020_14
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

comp(14971..15600)
DNA (630bp) protein (210aa)
siroheme synthase (EC:1.3.1.76)
Siroheme synthase id=3812280 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
Tax=GWF2_Melainabacteria_37_15_curated
L2_013_000G1_scaffold_2020_15
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15600..16577)
DNA (978bp) protein (326aa)
Farnesyl pyrophosphate synthetase (Fragment) n=1 Tax=Heliobacillus mobilis RepID=Q8GDT5_HELMO
Uncharacterized protein {ECO:0000313|EMBL:KJS22537.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
geranylgeranyl pyrophosphate synthase
L2_013_000G1_scaffold_2020_16
unknown

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comp(16574..17278)
DNA (705bp) protein (235aa)

This feature has no annotations

L2_013_000G1_scaffold_2020_17
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

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comp(17338..17907)
DNA (570bp) protein (190aa)
Class II aldolase/adducin family protein id=2518021 bin=GWA2_Elusimicrobia_56_46 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
class II aldolase/adducin family protein
Tax=GWC2_Elusimicrobia_56_31_curated
L2_013_000G1_scaffold_2020_18
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17900..18952)
DNA (1053bp) protein (351aa)
methylthioribose-1-phosphate isomerase n=1 Tax=Treponema primitia RepID=UPI000255518F
S-methyl-5-thioribose-1-phosphate isomerase
Tax=BJP_IG2069_Anaerolineales_43_63
L2_013_000G1_scaffold_2020_19
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18955..19770)
DNA (816bp) protein (272aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Purine nucleoside phosphorylase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LMZ9_9FIRM
inosine guanosine and xanthosine phosphorylase family protein
L2_013_000G1_scaffold_2020_20
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19826..20716)
DNA (891bp) protein (297aa)
Cell division protein FtsX n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNA8_DESK7
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
L2_013_000G1_scaffold_2020_21
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20703..21398)
DNA (696bp) protein (232aa)
Cell division ATP-binding protein FtsE n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVL0_RUBXD
cell division ATP-binding protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:ABG04568.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
L2_013_000G1_scaffold_2020_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21432..21710)
DNA (279bp) protein (93aa)
YegS//BmrU family lipid kinase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQG4_9FIRM
YegS//BmrU family lipid kinase {ECO:0000313|EMBL:EHL73543.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
Displaying 22 items

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