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L2_013_000G1_scaffold_1203

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1203_1
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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2..604
DNA (603bp) protein (201aa)
Integrase family protein n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q8I6_9CLOT
phage integrase family protein
Probable tyrosine recombinase XerC-like {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
L2_013_000G1_scaffold_1203_2
unknown

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1121..1741
DNA (621bp) protein (207aa)

This feature has no annotations

L2_013_000G1_scaffold_1203_3
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1954..2799
DNA (846bp) protein (282aa)
Pirin domain protein n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RET5_ANAPD
Pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:ACV29698.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
L2_013_000G1_scaffold_1203_4
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3007..4035
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AIT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ26403.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L2_013_000G1_scaffold_1203_5
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4078..6825)
DNA (2748bp) protein (916aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ABC19468.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABC19468.1};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037C3A3A
L2_013_000G1_scaffold_1203_6
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6822..8066)
DNA (1245bp) protein (415aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
Adenosylhomocysteinase n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BUR3_9BACL
ahcY; S-adenosyl-L-homocysteine hydrolase
L2_013_000G1_scaffold_1203_7
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8253..9167
DNA (915bp) protein (305aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
aspartate carbamoyltransferase n=1 Tax=Succinispira mobilis RepID=UPI00038214C1
L2_013_000G1_scaffold_1203_8
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9169..10470
DNA (1302bp) protein (434aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WFY7_9ACTN
L2_013_000G1_scaffold_1203_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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10467..11243
DNA (777bp) protein (259aa)
oxidoreductase n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A9165A
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L2_013_000G1_scaffold_1203_10
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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11236..12177
DNA (942bp) protein (314aa)
Dihydroorotate dehydrogenase n=1 Tax=Thermincola potens (strain JR) RepID=D5X7V7_THEPJ
dihydroorotate dehydrogenase family protein
Tax=BJP_IG2158_Thermincola_46_17
L2_013_000G1_scaffold_1203_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12167..12883
DNA (717bp) protein (239aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase n=1 Tax=Megamonas rupellensis RepID=UPI00036A3C14
L2_013_000G1_scaffold_1203_12
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12880..13464
DNA (585bp) protein (195aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPN5_9FIRM
L2_013_000G1_scaffold_1203_13

Not on your lists

13461..14765
DNA (1305bp) protein (435aa)
Small GTP-binding protein n=1 Tax=uncultured prokaryote RepID=H5SLU7_9ZZZZ
Small GTP-binding protein {ECO:0000313|EMBL:BAL57133.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
GTP-binding protein HflX
L2_013_000G1_scaffold_1203_14
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14762..16036
DNA (1275bp) protein (425aa)
Aluminum resistance family protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J5P8_DESRM
Uncharacterized protein {ECO:0000313|EMBL:KJS22387.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
aluminium resistance family protein
L2_013_000G1_scaffold_1203_15
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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16039..16524
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFD2_THEPJ
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
L2_013_000G1_scaffold_1203_16

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16527..17627
DNA (1101bp) protein (367aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=DDL_NATTJ
L2_013_000G1_scaffold_1203_17
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17627..18793
DNA (1167bp) protein (389aa)
Protein RecA n=2 Tax=Desulfitobacterium RepID=I4AAC0_DESDJ
protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L2_013_000G1_scaffold_1203_18
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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18790..19224
DNA (435bp) protein (145aa)
Regulatory protein RecX n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PY03_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
RecX family transcriptional regulator
L2_013_000G1_scaffold_1203_19
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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19418..20956
DNA (1539bp) protein (513aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
Ribonuclease Y n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPP5_9FIRM
RNA binding metal dependent phosphohydrolase
L2_013_000G1_scaffold_1203_20
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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21126..22400
DNA (1275bp) protein (425aa)
FAD-dependent oxidoreductase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B6FC85
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:CFX85537.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
NAD(FAD)-utilizing dehydrogenase
L2_013_000G1_scaffold_1203_21
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

22391..23047
DNA (657bp) protein (219aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000362406A
cytidylate kinase
L2_013_000G1_scaffold_1203_22
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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23120..25153
DNA (2034bp) protein (678aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Thermincola potens (strain JR) RepID=D5XFM1_THEPJ
hydroxymethylbutenyl pyrophosphate reductase
L2_013_000G1_scaffold_1203_23
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25406..25855
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L783_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE83087.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:273.;"
hypothetical protein
L2_013_000G1_scaffold_1203_24
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25864..26799
DNA (936bp) protein (312aa)
N utilization substance protein B homolog n=2 Tax=Blautia RepID=C0CM05_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
nusb antitermination factor
L2_013_000G1_scaffold_1203_25
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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26796..28013
DNA (1218bp) protein (406aa)
xseA; putative exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE26_9FIRM
L2_013_000G1_scaffold_1203_26
Photobacterium leiognathi, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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28024..28269
DNA (246bp) protein (82aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease 7 small subunit; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=553611 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium leiognathi.;"
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
UPI0003D37B5F related cluster n=1 Tax=unknown RepID=UPI0003D37B5F
L2_013_000G1_scaffold_1203_27
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28262..29140
DNA (879bp) protein (293aa)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TEJ3_HELMI
ispA; geranylgeranyl pyrophosphate synthase
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:ABZ82912.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
L2_013_000G1_scaffold_1203_28
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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29150..31033
DNA (1884bp) protein (628aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GQF0_FILAD
1-deoxy-D-xylulose-5-phosphate synthase
L2_013_000G1_scaffold_1203_29
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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31026..31823
DNA (798bp) protein (266aa)
Hemolysin A n=5 Tax=Acidaminococcus RepID=G4Q7J5_ACIIR
hemolysin A
Hemolysin A {ECO:0000313|EMBL:CDB94207.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L2_013_000G1_scaffold_1203_30
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31820..32326
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRT2_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY19074.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Displaying items 1-30 of 31 in total

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