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L2_013_000G1_scaffold_1834

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1834_1
Bacillus sp. JCM 19045, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..249
DNA (249bp) protein (83aa)
phosphatidylglycerophosphatase A (EC:3.1.3.27)
Low temperature requirement C protein n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2T9C5_9ENTE
Low temperature requirement C protein {ECO:0000313|EMBL:GAF12675.1}; TaxID=1460639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19045.;"
L2_013_000G1_scaffold_1834_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

258..764
DNA (507bp) protein (169aa)
Phosphopantetheine adenylyltransferase id=4939315 bin=GWC2_Ignavibacteria_56_12 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
phosphopantetheine adenylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
L2_013_000G1_scaffold_1834_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(818..1453)
DNA (636bp) protein (212aa)
Putative pyrophosphatase n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0J6Q8_AMPXN
Uncharacterized protein {ECO:0000313|EMBL:KJS21338.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
pyrophosphatase
L2_013_000G1_scaffold_1834_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1533..2009
DNA (477bp) protein (159aa)
Acetyltransferase (GNAT) family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRI4_9FIRM
Acetyltransferase (GNAT) family.
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CBK95703.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_013_000G1_scaffold_1834_5
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1993..4005
DNA (2013bp) protein (671aa)
ATP-dependent DNA helicase RecG n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMV7_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EAX48589.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
ATP-dependent DNA helicase RecG
L2_013_000G1_scaffold_1834_6
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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4014..4565
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GZ71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29825.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L2_013_000G1_scaffold_1834_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4583..5098
DNA (516bp) protein (172aa)
Archaeal/vacuolar-type H+-ATPase subunit H n=1 Tax=Patulibacter medicamentivorans RepID=H0E9S0_9ACTN
Archaeal/vacuolar-type H+-ATPase subunit H {ECO:0000313|EMBL:EHN09569.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
H+-ATPase subunit H
L2_013_000G1_scaffold_1834_8
unknown

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comp(5235..5354)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_013_000G1_scaffold_1834_9
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5378..5944)
DNA (567bp) protein (189aa)
Ribosomal subunit interface protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AX69_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KJS19061.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
yfiA; ribosomal subunit interface protein
L2_013_000G1_scaffold_1834_10
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6054..6389)
DNA (336bp) protein (112aa)
ArsR family transcriptional regulator n=1 Tax=Clostridium arbusti RepID=UPI0002886E40
hlyU; transcriptional activator HlyU
Putative transcriptional regulator {ECO:0000313|EMBL:EMS73508.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
L2_013_000G1_scaffold_1834_11
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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6668..9202
DNA (2535bp) protein (845aa)
Protein translocase subunit SecA n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYM1_THEOJ
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
protein translocase subunit secA
L2_013_000G1_scaffold_1834_12
Fictibacillus macauensis, Fictibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9304..10371
DNA (1068bp) protein (356aa)
Peptide chain release factor 2 n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8UJD7_9BACI
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1196324 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Fictibacillus.;" source="Bacillus macauensis ZFHKF-1.;"
hypothetical protein
L2_013_000G1_scaffold_1834_13
unknown

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10483..10722
DNA (240bp) protein (80aa)

This feature has no annotations

L2_013_000G1_scaffold_1834_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10719..11546)
DNA (828bp) protein (276aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=2 Tax=Dorea RepID=B0G6R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72888.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_013_000G1_scaffold_1834_15
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11533..12354)
DNA (822bp) protein (274aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Dihydropteroate synthase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLD3_9FIRM
hypothetical protein
L2_013_000G1_scaffold_1834_16
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12384..12860)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002EF71C9
Uncharacterized protein {ECO:0000313|EMBL:EWM52293.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
metal dependent phosphohydrolase
L2_013_000G1_scaffold_1834_17
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(12857..13414)
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QG14_9FIRM
L2_013_000G1_scaffold_1834_18
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13411..14880)
DNA (1470bp) protein (490aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJ78_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50189.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L2_013_000G1_scaffold_1834_19
unknown

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14968..15129
DNA (162bp) protein (54aa)

This feature has no annotations

L2_013_000G1_scaffold_1834_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15205..15543
DNA (339bp) protein (113aa)
CGGC domain protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KX21_CLOBM
CGGC domain-containing protein
CGGC domain protein {ECO:0000313|EMBL:ACA56228.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L2_013_000G1_scaffold_1834_21
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15621..16982
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG3X2-2 RepID=J7XRK9_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJQ14691.1}; TaxID=1053184 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG3X2-2.;"
MFS transporter
L2_013_000G1_scaffold_1834_22
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17038..17304
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R5I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44975.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
FeFe hydrogenase system regulator
L2_013_000G1_scaffold_1834_23
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17294..18349
DNA (1056bp) protein (352aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation protein HydE {ECO:0000313|EMBL:CBL24281.1}; EC=2.8.1.6 {ECO:0000313|EMBL:CBL24281.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Iron-only hydrogenase maturation protein HydE n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LU23_9FIRM
L2_013_000G1_scaffold_1834_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18409..19848
DNA (1440bp) protein (480aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLC8_9FIRM
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EDS01527.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
iron-only hydrogenase maturation protein HydG
L2_013_000G1_scaffold_1834_25
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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19848..21047
DNA (1200bp) protein (400aa)
Putative GTP-binding protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GU19_SELRL
putative GTP-binding protein
Putative GTP-binding protein {ECO:0000313|EMBL:BAL84256.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L2_013_000G1_scaffold_1834_26
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21139..21960
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. G RepID=S4YTL1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP47786.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G.;"
L2_013_000G1_scaffold_1834_27
Listeria fleischmannii, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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22125..22538
DNA (414bp) protein (138aa)
OsmC/Ohr family protein n=2 Tax=Listeria fleischmannii RepID=M3GRJ4_9LIST
OsmC/Ohr family protein {ECO:0000313|EMBL:EIA18893.1}; Flags: Fragment;; TaxID=1081736 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria fleischmannii subsp. coloradonensis.;"
OsmC family protein
L2_013_000G1_scaffold_1834_28
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22909..23343)
DNA (435bp) protein (145aa)
Putative permease, DMT superfamily n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A925_DESDJ
permease, DMT superfamily
Putative permease, DMT superfamily {ECO:0000313|EMBL:AFM00460.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
Displaying 28 items

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