ggKbase home page

L2_013_000G1_scaffold_4413

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_4413_1
Paenibacillus sp. E194, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(509..1468)
DNA (960bp) protein (320aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Paenibacillus alvei TS-15 RepID=S9TTC0_PAEAL
Cytochrome C2 {ECO:0000313|EMBL:KJB88468.1}; TaxID=1458845 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. E194.;"
L2_013_000G1_scaffold_4413_2
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1507..2244)
DNA (738bp) protein (246aa)
dapB; dihydrodipicolinate reductase DapB (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0L8_CLOA9
L2_013_000G1_scaffold_4413_3
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2247..3134)
DNA (888bp) protein (296aa)
dapA; 4-hydroxy-tetrahydrodipicolinate synthase (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. ASF356 RepID=N1Z5E5_9CLOT
L2_013_000G1_scaffold_4413_4
Brochothrix thermosphacta, Brochothrix, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3177..4478)
DNA (1302bp) protein (434aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1121126 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Brochothrix.;" source="Brochothrix thermosphacta DSM 20171 = FSL F6-1036.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9G6Q7_9BACL
L2_013_000G1_scaffold_4413_5
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4928..5869)
DNA (942bp) protein (314aa)
Fructose-1,6-bisphosphatase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRW8_9FIRM
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
fructose-1,6-bisphosphatase, class II
L2_013_000G1_scaffold_4413_6
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5882..6736)
DNA (855bp) protein (285aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.40)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ADG83749.1}; EC=4.1.2.40 {ECO:0000313|EMBL:ADG83749.1};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Thermincola potens (strain JR) RepID=D5XDK3_THEPJ
L2_013_000G1_scaffold_4413_7
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6748..8424)
DNA (1677bp) protein (559aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=SYR_MOOTA
L2_013_000G1_scaffold_4413_8
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8440..9930)
DNA (1491bp) protein (497aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|SAAS:SAAS00276926};; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.-)
UDP-N-acetylmuramyl-tripeptide synthetases n=1 Tax=Blautia sp. CAG:37 RepID=R7JVH7_9FIRM
L2_013_000G1_scaffold_4413_9
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9933..10343)
DNA (411bp) protein (137aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UTX7_9FIRM
ribosomal protein L11 methyltransferase
Displaying 9 items

View Taxonomy