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L2_013_000G1_scaffold_3055

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_3055_1
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(403..1074)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXA8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF80559.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
hypothetical protein
L2_013_000G1_scaffold_3055_2
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1076..2680)
DNA (1605bp) protein (535aa)
Iron-sulfur cluster-binding protein n=1 Tax=Actinomyces graevenitzii C83 RepID=G9PDL0_9ACTO
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EHM89428.1}; TaxID=435830 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
(4Fe-4S) cluster-containing protein
L2_013_000G1_scaffold_3055_3
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2682..3512)
DNA (831bp) protein (277aa)
Cysteine-rich domain protein n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1Q8H5_9ACTO
Cysteine-rich domain protein {ECO:0000313|EMBL:ERH24140.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
Fe-S oxidoreductase
L2_013_000G1_scaffold_3055_4
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3844..4401)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Actinomyces graevenitzii C83 RepID=G9PDL2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHM89430.1}; TaxID=435830 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
L2_013_000G1_scaffold_3055_5
unknown

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comp(4432..4629)
DNA (198bp) protein (66aa)

This feature has no annotations

L2_013_000G1_scaffold_3055_6
Corynebacterium atypicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5218..6999
DNA (1782bp) protein (594aa)
Type I restriction enzyme M protein n=1 Tax=Corynebacterium diphtheriae (strain VA01) RepID=H2I4X1_CORDV
hsdM; type I restriction enzyme M protein
Restriction endonuclease subunit M {ECO:0000313|EMBL:AIG63535.1}; TaxID=191610 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium atypicum.;"
L2_013_000G1_scaffold_3055_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6996..8150
DNA (1155bp) protein (385aa)
hsdS; type I restriction enzyme, S subunit (EC:3.1.21.3)
Restriction endonuclease S subunit n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0D0I0_RHILT
Restriction endonuclease S subunit {ECO:0000313|EMBL:EJC85805.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
L2_013_000G1_scaffold_3055_8
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8154..11291
DNA (3138bp) protein (1046aa)
Type III restriction enzyme, res subunit n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1QH47_9ACTO
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:ERH26970.1}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
restriction endonuclease subunit R
L2_013_000G1_scaffold_3055_9
unknown

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comp(11368..11511)
DNA (144bp) protein (48aa)

This feature has no annotations

L2_013_000G1_scaffold_3055_10
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11629..12102)
DNA (474bp) protein (158aa)
Transcriptional regulator MerR family n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6X614_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDD01907.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
transcriptional regulator
L2_013_000G1_scaffold_3055_11
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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12209..12616
DNA (408bp) protein (136aa)
Cupin domain protein n=1 Tax=Gordonia sp. NB4-1Y RepID=M7AML4_9ACTO
Cupin domain protein {ECO:0000313|EMBL:EMP15290.1}; TaxID=1241906 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. NB4-1Y.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L2_013_000G1_scaffold_3055_12
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12627..12986
DNA (360bp) protein (120aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z5S9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV67462.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
4-carboxymuconolactone decarboxylase
L2_013_000G1_scaffold_3055_13
Propionibacterium acidifaciens, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12976..13494
DNA (519bp) protein (173aa)
Putative general stress protein 14 n=1 Tax=Propionibacterium acidifaciens F0233 RepID=U2PTB7_9ACTO
Putative general stress protein 14 {ECO:0000313|EMBL:ERK53765.1}; TaxID=553198 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidifaciens F0233.;"
NAD(P)H oxidoreductase
L2_013_000G1_scaffold_3055_14
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14267..14869
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Actinomyces graevenitzii F0530 RepID=U1PDV0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERH14810.1}; TaxID=1321817 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii F0530.;"
hypothetical protein
Displaying 14 items

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