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L2_013_000G1_scaffold_707

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_707_1
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
Flavodoxin-like protein n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LR94_9PAST
Flavodoxin-like protein {ECO:0000313|EMBL:EHO45200.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
NADPH quinone reductase
L2_013_000G1_scaffold_707_2
[Mannheimia] succiniciproducens, Basfia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(353..1261)
DNA (909bp) protein (303aa)
LysR protein n=1 Tax=Mannheimia succiniciproducens (strain MBEL55E) RepID=Q65SQ0_MANSM
lysR; LysR protein
LysR protein {ECO:0000313|EMBL:AAU38010.1}; TaxID=221988 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Basfia.;" source="Mannheimia succiniciproducens (strain MBEL55E).;"
L2_013_000G1_scaffold_707_3
[Mannheimia] succiniciproducens, Basfia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1402..1929
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens (strain MBEL55E) RepID=Q65SP9_MANSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU38011.1}; TaxID=221988 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Basfia.;" source="Mannheimia succiniciproducens (strain MBEL55E).;"
L2_013_000G1_scaffold_707_4
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1955..2131)
DNA (177bp) protein (59aa)
Putative integrase, catalytic core n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H0L6_HAEHA
Putative integrase, catalytic core {ECO:0000313|EMBL:EGT79429.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
transposase
L2_013_000G1_scaffold_707_5
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2156..2713)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=21 Tax=Haemophilus RepID=A5UE08_HAEIE
nusG; Transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=374933 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae PittII.;"
L2_013_000G1_scaffold_707_6
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2715..3131)
DNA (417bp) protein (139aa)
Protein translocase subunit SecE n=2 Tax=Haemophilus haemolyticus RepID=F9GWR3_HAEHA
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
preprotein translocase membrane subunit
L2_013_000G1_scaffold_707_7
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3271..4512)
DNA (1242bp) protein (414aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H8I9_HAEHA
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L2_013_000G1_scaffold_707_8
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4521..5102)
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
clpP; ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Haemophilus haemolyticus RepID=F9H286_HAEHA
L2_013_000G1_scaffold_707_9
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5229..6527)
DNA (1299bp) protein (433aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
tig; Trigger factor (EC:5.2.1.8)
Trigger factor n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GWP1_HAEHA
L2_013_000G1_scaffold_707_10
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6847..7956
DNA (1110bp) protein (370aa)
Outer membrane protein p2 n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W2A1_HAEP3
ompH; outer membrane protein p2
Outer membrane protein p2 {ECO:0000313|EMBL:CBW14488.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L2_013_000G1_scaffold_707_11
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8052..8309
DNA (258bp) protein (86aa)
Flavinator of succinate dehydrogenase n=2 Tax=Haemophilus haemolyticus RepID=I3DTD3_HAEHA
Flavinator of succinate dehydrogenase {ECO:0000313|EMBL:EIJ74976.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
hypothetical protein
L2_013_000G1_scaffold_707_12
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8418..8996
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=6 Tax=Haemophilus RepID=C4F6X1_HAEIF
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
rpoE_2; Sigma-24
L2_013_000G1_scaffold_707_13
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9014..9601
DNA (588bp) protein (196aa)
Putative sigma-E factor negative regulatory protein n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNJ3_9PAST
Anti-sigma-E factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Regulator of SigE {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E anti-sigma factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E factor negative regulatory protein {ECO:0000256|PIRNR:PIRNR016938}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
sigma-E factor negative regulatory protein
L2_013_000G1_scaffold_707_14
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9689..10636
DNA (948bp) protein (316aa)
Putative sigma-E factor regulatory protein RseB n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNJ4_9PAST
Putative sigma-E factor regulatory protein RseB {ECO:0000313|EMBL:EHO47868.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
rseB; Sigma factor RpoE negative regulatory protein RseB precursor
L2_013_000G1_scaffold_707_15
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10678..10938)
DNA (261bp) protein (87aa)
Putative transposase-like protein n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GQQ1_HAEHA
Putative transposase-like protein {ECO:0000313|EMBL:EGT74404.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
transposase
L2_013_000G1_scaffold_707_16
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11516..12088)
DNA (573bp) protein (191aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LQJ4_9PAST
hypothetical protein
L2_013_000G1_scaffold_707_17
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12176..12532)
DNA (357bp) protein (119aa)
Dihydroneopterin aldolase n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GI68_HAEHA
dihydroneopterin aldolase
Haemophilus influenzae strain RMHi93 ctg7180000001674, whole genome shotgun sequence {ECO:0000313|EMBL:KIP48851.1}; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae.;"
L2_013_000G1_scaffold_707_18
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12639..13214
DNA (576bp) protein (192aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Haemophilus influenzae NT127 RepID=C9MDS9_HAEIF
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=656913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae NT127.;"
glycerol-3-phosphate acyltransferase PlsY
L2_013_000G1_scaffold_707_19
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13267..14970
DNA (1704bp) protein (568aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
Sensory histidine kinase in two-component regulatory system with NarP (NarL) n=1 Tax=Haemophilus influenzae PittHH RepID=A4NLV0_HAEIF
narQ; nitrate/nitrite sensor protein NarQ
L2_013_000G1_scaffold_707_20
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15058..16083
DNA (1026bp) protein (342aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GXI3_HAEHA
L2_013_000G1_scaffold_707_21
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16131..16766
DNA (636bp) protein (212aa)
Urease accessory protein UreG n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GW15_HAEHA
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
ureG; urease accessory protein UreG
L2_013_000G1_scaffold_707_22
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16820..17632
DNA (813bp) protein (271aa)
Urease accessory protein UreD n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GW16_HAEHA
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
ureH; urease accessory protein ureh
L2_013_000G1_scaffold_707_23
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17788..19206
DNA (1419bp) protein (473aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
Aspartate ammonia-lyase n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GXG4_HAEHA
aspartate ammonia-lyase
L2_013_000G1_scaffold_707_24
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19306..20673)
DNA (1368bp) protein (456aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000850}; EC=2.7.8.8 {ECO:0000256|PIRNR:PIRNR000850};; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GV05_HAEHA
CDP-diacylglycerol--serine O-phosphatidyltransferase
L2_013_000G1_scaffold_707_25
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20820..21875
DNA (1056bp) protein (352aa)
Putative tRNA/rRNA methyltransferase, SpoU n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GPZ6_HAEHA
Putative tRNA/rRNA methyltransferase, SpoU {ECO:0000313|EMBL:EGT75178.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
rRNA methylase
L2_013_000G1_scaffold_707_26
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22126..25356
DNA (3231bp) protein (1077aa)
Putative yadA-like protein n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GJ69_HAEHA
Putative adhesin YadA, collagen-binding domain-containing protein {ECO:0000313|EMBL:EGT74073.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
coiled stalk of trimeric autotransporter adhesin family protein
L2_013_000G1_scaffold_707_27
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25399..26097)
DNA (699bp) protein (233aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GWX5_HAEHA
Putative methyltransferase
L2_013_000G1_scaffold_707_28
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26178..27503
DNA (1326bp) protein (442aa)
ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
ATP-dependent RNA helicase SrmB n=2 Tax=Haemophilus haemolyticus RepID=F9GV08_HAEHA
ATP-dependent RNA helicase
L2_013_000G1_scaffold_707_29
Haemophilus aegyptius, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27582..27914)
DNA (333bp) protein (111aa)
DNA integrase (Fragment) n=2 Tax=Haemophilus RepID=F2C489_HAEAE
transposase
DNA integrase {ECO:0000313|EMBL:EGF12315.1}; Flags: Fragment;; TaxID=888728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus aegyptius ATCC 11116.;"
L2_013_000G1_scaffold_707_30
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28998..29777)
DNA (780bp) protein (260aa)
Glycerol-3-phosphate regulon repressor n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GXR7_HAEHA
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EGT81413.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
transcriptional regulator
Displaying items 1-30 of 48 in total

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