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L2_013_000G1_scaffold_4561

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_4561_1
Prevotella disiens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..574
DNA (573bp) protein (191aa)
CAAX protease n=1 Tax=Prevotella veroralis RepID=UPI000362C1CE
CAAX protease {ECO:0000313|EMBL:KGF44429.1}; TaxID=1401075 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella disiens DNF00882.;"
Abi family protein
L2_013_000G1_scaffold_4561_2
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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966..2927
DNA (1962bp) protein (654aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 279 str. F0450.;"
Threonine--tRNA ligase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VWQ7_9PORP
thrS; threonyl-tRNA synthetase
L2_013_000G1_scaffold_4561_3
Porphyromonas sp. KLE 1280, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2967..3554
DNA (588bp) protein (196aa)
Translation initiation factor IF-3 n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GV62_9PORP
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=997829 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. KLE 1280.;"
infC; translation initiation factor IF-3
L2_013_000G1_scaffold_4561_4
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3643..3840
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Porphyromonas RepID=J4VRE0_9PORP
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 279 str. F0450.;"
rpmI; 50S ribosomal protein L35
L2_013_000G1_scaffold_4561_5
Porphyromonas sp. KLE 1280, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3956..4300
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=2 Tax=Porphyromonas RepID=J5VWT5_9PORP
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=997829 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. KLE 1280.;"
rplT; 50S ribosomal protein L20
L2_013_000G1_scaffold_4561_6
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4506..4934
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IB47_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERJ71091.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 278 str. W7784.;"
hypothetical protein
L2_013_000G1_scaffold_4561_7
Porphyromonas sp. KLE 1280, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5220..6497
DNA (1278bp) protein (426aa)
malic enzyme (EC:1.1.1.40)
Malic enzyme, NAD-binding domain protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6H297_9PORP
Malic enzyme, NAD binding domain protein {ECO:0000313|EMBL:KDU78437.1}; TaxID=997829 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. KLE 1280.;"
L2_013_000G1_scaffold_4561_8
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6602..7171)
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VRD4_9PORP
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 279 str. F0450.;"
elongation factor P
L2_013_000G1_scaffold_4561_9
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7242..7784)
DNA (543bp) protein (181aa)
HDIG domain protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VWY7_9PORP
HDIG domain protein {ECO:0000313|EMBL:EJU17342.1}; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 279 str. F0450.;"
HDIG domain-containing protein
L2_013_000G1_scaffold_4561_10
Porphyromonas sp. KLE 1280, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7781..8344)
DNA (564bp) protein (188aa)
Colicin V production protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VWQ0_9PORP
CvpA family protein {ECO:0000313|EMBL:KDU78434.1}; TaxID=997829 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. KLE 1280.;"
L2_013_000G1_scaffold_4561_11
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9429..9986
DNA (558bp) protein (186aa)
RecF/RecN/SMC N-terminal domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9V1_9BACE
PgaA protein {ECO:0000313|EMBL:CDB49767.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
putative ATP-binding protein involved in virulence
Displaying 11 items

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