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L2_013_000G1_scaffold_325

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_325_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(314..703)
DNA (390bp) protein (130aa)
UPI0003D68504 related cluster n=1 Tax=unknown RepID=UPI0003D68504
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
CrcB family protein
L2_013_000G1_scaffold_325_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(703..1221)
DNA (519bp) protein (173aa)
UPI0003D5F9FD related cluster n=1 Tax=unknown RepID=UPI0003D5F9FD
Putative fluoride ion transporter CrcB {ECO:0000256|RuleBase:RU004340}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_000G1_scaffold_325_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1239..2804)
DNA (1566bp) protein (522aa)
UPI0003D5B036 related cluster n=1 Tax=unknown RepID=UPI0003D5B036
Uncharacterized protein {ECO:0000313|EMBL:ETI82267.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
TAP domain-containing protein
L2_013_000G1_scaffold_325_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2808..4001)
DNA (1194bp) protein (398aa)
UPI0003D66D30 related cluster n=1 Tax=unknown RepID=UPI0003D66D30
Uncharacterized protein {ECO:0000313|EMBL:ETI82266.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
DNA polymerase III, delta prime subunit
L2_013_000G1_scaffold_325_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3998..4747)
DNA (750bp) protein (250aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D64097 related cluster n=1 Tax=unknown RepID=UPI0003D64097
thymidylate kinase
L2_013_000G1_scaffold_325_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4853..6355)
DNA (1503bp) protein (501aa)
UPI0003D66A03 related cluster n=1 Tax=unknown RepID=UPI0003D66A03
Uncharacterized protein {ECO:0000313|EMBL:ETI82264.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
RNA nucleotidyltransferase
L2_013_000G1_scaffold_325_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6442..6945
DNA (504bp) protein (168aa)
UPI0003D65322 related cluster n=1 Tax=unknown RepID=UPI0003D65322
NUDIX hydrolase {ECO:0000313|EMBL:ETI82263.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NUDIX hydrolase
L2_013_000G1_scaffold_325_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6947..9106
DNA (2160bp) protein (720aa)
UPI0003D6343F related cluster n=1 Tax=unknown RepID=UPI0003D6343F
Uncharacterized protein {ECO:0000313|EMBL:ETI82262.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_013_000G1_scaffold_325_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9123..13262
DNA (4140bp) protein (1380aa)
UPI0003D660C0 related cluster n=1 Tax=unknown RepID=UPI0003D660C0
Uncharacterized protein {ECO:0000313|EMBL:ETI82261.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
integral membrane protein MviN
L2_013_000G1_scaffold_325_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13375..14295
DNA (921bp) protein (307aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
thioredoxin reductase (EC:1.8.1.9)
UPI0003D5C59D related cluster n=1 Tax=unknown RepID=UPI0003D5C59D
L2_013_000G1_scaffold_325_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14335..14664
DNA (330bp) protein (110aa)
UPI0003D6533B related cluster n=1 Tax=unknown RepID=UPI0003D6533B
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
thioredoxin
L2_013_000G1_scaffold_325_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14807..15487
DNA (681bp) protein (227aa)
UPI0003D6872E related cluster n=1 Tax=unknown RepID=UPI0003D6872E
Uncharacterized protein {ECO:0000313|EMBL:ETI82257.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_000G1_scaffold_325_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15629..17170)
DNA (1542bp) protein (514aa)
pntB2; NAD(P)(+) transhydrogenase (AB-specific) (EC:1.6.1.2)
UPI0003D69B25 related cluster n=1 Tax=unknown RepID=UPI0003D69B25
Uncharacterized protein {ECO:0000313|EMBL:ETI82256.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_000G1_scaffold_325_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17174..18733)
DNA (1560bp) protein (520aa)
ald; alanine dehydrogenase (EC:1.4.1.1)
UPI0003D5E29D related cluster n=1 Tax=unknown RepID=UPI0003D5E29D
Uncharacterized protein {ECO:0000313|EMBL:ETI82255.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_000G1_scaffold_325_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18887..19105)
DNA (219bp) protein (73aa)
UPI0003D694C0 related cluster n=1 Tax=unknown RepID=UPI0003D694C0
Uncharacterized protein {ECO:0000313|EMBL:ETI82254.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
carbon storage regulator
L2_013_000G1_scaffold_325_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19130..19570)
DNA (441bp) protein (147aa)
UPI0003D5A0A4 related cluster n=1 Tax=unknown RepID=UPI0003D5A0A4
Uncharacterized protein {ECO:0000313|EMBL:ETI82253.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_000G1_scaffold_325_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19914..21104
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B5F1A0
Uncharacterized protein {ECO:0000313|EMBL:ETI82251.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_013_000G1_scaffold_325_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21309..23861
DNA (2553bp) protein (851aa)
UPI0003D68714 related cluster n=1 Tax=unknown RepID=UPI0003D68714
Uncharacterized protein {ECO:0000313|EMBL:ETI82250.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
MMPL domain-containing protein
L2_013_000G1_scaffold_325_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23901..25226)
DNA (1326bp) protein (442aa)
UPI0003D61EBF related cluster n=1 Tax=unknown RepID=UPI0003D61EBF
Uncharacterized protein {ECO:0000313|EMBL:ETI82249.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
replicative DNA helicase
L2_013_000G1_scaffold_325_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25461..26774
DNA (1314bp) protein (438aa)
UPI0003D62A03 related cluster n=1 Tax=unknown RepID=UPI0003D62A03
Uncharacterized protein {ECO:0000313|EMBL:ETI82248.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
MATE family efflux protein
L2_013_000G1_scaffold_325_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(26904..27365)
DNA (462bp) protein (154aa)
UPI0003D65A9E related cluster n=1 Tax=unknown RepID=UPI0003D65A9E
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L9
L2_013_000G1_scaffold_325_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27381..27623)
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=1 Tax=Varibaculum cambriense RepID=UPI0003B62D9D
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpsR; 30S ribosomal protein S18
L2_013_000G1_scaffold_325_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27668..28243)
DNA (576bp) protein (192aa)
UPI0003D5BF81 related cluster n=1 Tax=unknown RepID=UPI0003D5BF81
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
single-strand binding protein
L2_013_000G1_scaffold_325_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(28264..28548)
DNA (285bp) protein (95aa)
UPI0003D5A842 related cluster n=1 Tax=unknown RepID=UPI0003D5A842
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S6
L2_013_000G1_scaffold_325_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28792..31230)
DNA (2439bp) protein (813aa)
UPI0003D6848C related cluster n=1 Tax=unknown RepID=UPI0003D6848C
Uncharacterized protein {ECO:0000313|EMBL:ETI82243.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
penicillin-binding protein
L2_013_000G1_scaffold_325_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31684..33096)
DNA (1413bp) protein (471aa)
UPI0003D66DF6 related cluster n=1 Tax=unknown RepID=UPI0003D66DF6
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
chromosomal replication initiator protein dnaA
L2_013_000G1_scaffold_325_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33722..33991
DNA (270bp) protein (90aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D6210D related cluster n=1 Tax=unknown RepID=UPI0003D6210D
ribonuclease P protein component
L2_013_000G1_scaffold_325_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34337..35707
DNA (1371bp) protein (457aa)
UPI0003D5B50D related cluster n=1 Tax=unknown RepID=UPI0003D5B50D
Membrane protein OxaA {ECO:0000313|EMBL:ETI82238.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
YidC/Oxa1 family membrane protein insertase
L2_013_000G1_scaffold_325_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35743..36267
DNA (525bp) protein (175aa)
UPI0003D62FEC related cluster n=1 Tax=unknown RepID=UPI0003D62FEC
R3H protein {ECO:0000313|EMBL:ETI82237.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
single-stranded nucleic acid binding R3H domain-containing protein
L2_013_000G1_scaffold_325_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36329..36982
DNA (654bp) protein (218aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5CD00 related cluster n=1 Tax=unknown RepID=UPI0003D5CD00
methyltransferase GidB
Displaying items 1-30 of 60 in total

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