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L2_013_000G1_scaffold_3104

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_3104_1
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..292
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V3Y0_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47459.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L2_013_000G1_scaffold_3104_2
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(442..717)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N0T6_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDK34732.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L2_013_000G1_scaffold_3104_3
unknown

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849..1112
DNA (264bp) protein (88aa)

This feature has no annotations

L2_013_000G1_scaffold_3104_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1198..1599
DNA (402bp) protein (134aa)
Putative HTH-type transcriptional regulator AdhR n=2 Tax=Oscillibacter RepID=U2Q961_9FIRM
Putative HTH-type transcriptional regulator AdhR {ECO:0000313|EMBL:ERK59423.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transcriptional regulator, MerR family
L2_013_000G1_scaffold_3104_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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1683..2501
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46808.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_3104_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2538..3263)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59753.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
nitroreductase
L2_013_000G1_scaffold_3104_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3461..3880
DNA (420bp) protein (140aa)
Histidine triad domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LM77_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:EET58255.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
HIT domain-containing protein
L2_013_000G1_scaffold_3104_8
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3959..4555)
DNA (597bp) protein (199aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NNB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC07716.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L2_013_000G1_scaffold_3104_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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4802..6331
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SG14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45547.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
cell envelope-related function transcriptional attenuator common domain
L2_013_000G1_scaffold_3104_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(6417..7196)
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCJ3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
RNA polymerase, sigma subunit, RpsG/SigG
L2_013_000G1_scaffold_3104_11
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7702..8496)
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LA16_BLAHA
L2_013_000G1_scaffold_3104_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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8769..9029
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037FFE73
Toxin-antitoxin system toxin component PIN family {ECO:0000313|EMBL:CDC43735.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_3104_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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9136..10170
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S9N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43342.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_013_000G1_scaffold_3104_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(10264..10725)
DNA (462bp) protein (154aa)
Adenylate cyclase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJV2_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:CDC43336.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
adenylate cyclase
L2_013_000G1_scaffold_3104_15
unknown

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10831..10986
DNA (156bp) protein (52aa)

This feature has no annotations

L2_013_000G1_scaffold_3104_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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10932..11489
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43331.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DJ-1 family protein
L2_013_000G1_scaffold_3104_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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11644..12957
DNA (1314bp) protein (438aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Trigger factor n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDE1_9FIRM
trigger factor
L2_013_000G1_scaffold_3104_18
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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12994..13575
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Lachnospiraceae RepID=C9LA09_BLAHA
hypothetical protein
L2_013_000G1_scaffold_3104_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13667..14734
DNA (1068bp) protein (356aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9U1_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
clpX2; ATP-dependent Clp protease ATP-binding subunit ClpX
Displaying 19 items

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