ggKbase home page

L2_013_000G1_scaffold_693

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_693_1
unknown

Not on your lists

2..154
DNA (153bp) protein (51aa)

This feature has no annotations

L2_013_000G1_scaffold_693_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

151..1179
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ABW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23590.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
DNA methylase
L2_013_000G1_scaffold_693_3
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1245..4331
DNA (3087bp) protein (1029aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DED2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ29702.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L2_013_000G1_scaffold_693_4
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4328..4558
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IYK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26928.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L2_013_000G1_scaffold_693_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4558..5415
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JYH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39006.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_013_000G1_scaffold_693_6
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5585..6502)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ABN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ26852.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Abortive infection bacteriophage resistance protein
L2_013_000G1_scaffold_693_7
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6852..7274
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=N2ABW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS74088.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_013_000G1_scaffold_693_8
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7322..8947)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A6D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ19934.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Relaxase/Mobilisation nuclease domain.
L2_013_000G1_scaffold_693_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8919..9359)
DNA (441bp) protein (147aa)
Bacterial mobilisation protein (MobC) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K1_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilisation protein (MobC) {ECO:0000313|EMBL:CBL13841.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_013_000G1_scaffold_693_10
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9607..10200)
DNA (594bp) protein (198aa)
TetR family HTH transcriptional regulator n=3 Tax=Clostridium acetobutylicum RepID=F0KEE3_CLOAE
TetR family HTH transcriptional regulator
TetR family HTH transcriptional regulator {ECO:0000313|EMBL:AAK76792.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_013_000G1_scaffold_693_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10394..12769
DNA (2376bp) protein (792aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL26978.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL26978.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Beta-glucosidase-related glycosidases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6W6_9FIRM
L2_013_000G1_scaffold_693_12
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12791..14125
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B45F4F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ16639.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
L2_013_000G1_scaffold_693_13
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14139..16766
DNA (2628bp) protein (876aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B4EC4F
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:CCX83519.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
beta-glucosidase
L2_013_000G1_scaffold_693_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16806..19283
DNA (2478bp) protein (826aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35095.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase
L2_013_000G1_scaffold_693_15
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19276..20043
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MQ29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72766.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Predicted xylanase/chitin deacetylase
L2_013_000G1_scaffold_693_16
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20060..20785
DNA (726bp) protein (242aa)
lipase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B5447D
Uncharacterized protein {ECO:0000313|EMBL:CCY68948.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Lysophospholipase L1 and related esterases
L2_013_000G1_scaffold_693_17
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20782..21696
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003780D56
Uncharacterized protein {ECO:0000313|EMBL:EOS38342.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Predicted permeases
L2_013_000G1_scaffold_693_18
unknown

Not on your lists

21722..22552
DNA (831bp) protein (277aa)

This feature has no annotations

L2_013_000G1_scaffold_693_19
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22601..24979
DNA (2379bp) protein (793aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00036A9A2E
Uncharacterized protein {ECO:0000313|EMBL:EET62979.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
xylosidase
L2_013_000G1_scaffold_693_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25324..25689)
DNA (366bp) protein (122aa)
Predicted transcriptional regulators n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2L9_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL13859.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_013_000G1_scaffold_693_21
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26287..26697
DNA (411bp) protein (137aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBS7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGG82388.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Sigma-70, region 4.
L2_013_000G1_scaffold_693_22
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26706..26945
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82387.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
putative conjugative transposon proteinTn916-like, CTn6-Orf4
L2_013_000G1_scaffold_693_23
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27362..27559
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82386.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L2_013_000G1_scaffold_693_24
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27650..27829
DNA (180bp) protein (60aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=N2AAD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23050.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L2_013_000G1_scaffold_693_25
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27867..29108
DNA (1242bp) protein (414aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N2AF86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOS22093.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
transposase
L2_013_000G1_scaffold_693_26
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29271..29813
DNA (543bp) protein (181aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RZW6_9CLOT
L2_013_000G1_scaffold_693_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30155..30637
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44780.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_013_000G1_scaffold_693_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30851..31969
DNA (1119bp) protein (373aa)
Fic family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA59_9FIRM
Fic family protein {ECO:0000313|EMBL:CDE35112.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Protein involved in cell division
L2_013_000G1_scaffold_693_29
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31935..32423)
DNA (489bp) protein (163aa)
Transcriptional regulator n=2 Tax=Clostridium RepID=D6DHJ8_CLOSC
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBK77172.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_013_000G1_scaffold_693_30
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32505..32864
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J4H2_9FIRM
conserved hypothetical protein (putative transposase or invertase)
Uncharacterized protein {ECO:0000313|EMBL:CBK79243.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Displaying items 1-30 of 47 in total

View Taxonomy