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L2_013_000G1_scaffold_6013

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_6013_1
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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98..637
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=2 Tax=Lachnospiraceae RepID=F3ACC2_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
LSU ribosomal protein L6P
L2_013_000G1_scaffold_6013_2
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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655..1023
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=3 Tax=Lachnospiraceae RepID=C9LAB4_BLAHA
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
LSU ribosomal protein L18P
L2_013_000G1_scaffold_6013_3
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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1043..1552
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=3 Tax=Lachnospiraceae RepID=C9LAB3_BLAHA
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
SSU ribosomal protein S5P
L2_013_000G1_scaffold_6013_4
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1566..1748
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=3 Tax=Lachnospiraceae RepID=C9LAB2_BLAHA
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
RpmD; 50S ribosomal protein L30/L7E
L2_013_000G1_scaffold_6013_5
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1774..2214
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=3 Tax=Lachnospiraceae RepID=C9LAB1_BLAHA
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
LSU ribosomal protein L15P
L2_013_000G1_scaffold_6013_6
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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2214..3530
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6B7_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
protein translocase subunit secY/sec61 alpha
L2_013_000G1_scaffold_6013_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3758..4402
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGS7_9FIRM
L2_013_000G1_scaffold_6013_8
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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4408..5163
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NPZ2_9FIRM
L2_013_000G1_scaffold_6013_9
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5177..5452
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LAA7_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20905.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_013_000G1_scaffold_6013_10
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5458..5676
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=5 Tax=Firmicutes RepID=C9LAA6_BLAHA
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
translation initiation factor IF-1
L2_013_000G1_scaffold_6013_11
unknown

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comp(6121..6246)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_013_000G1_scaffold_6013_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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6889..7260
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2K0_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
30S ribosomal protein S13
L2_013_000G1_scaffold_6013_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7329..7424
DNA (96bp) protein (32aa)
30S ribosomal protein S11 n=2 Tax=Butyrivibrio RepID=D4RZH7_9FIRM
SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying 13 items

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