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L2_013_000G1_scaffold_2173

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2173_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1..609)
DNA (609bp) protein (203aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4J0_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_2173_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(609..1478)
DNA (870bp) protein (290aa)
UPF0042 nucleotide-binding protein BN652_02712 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIM3_9FIRM
Nucleotide-binding protein BN652_02712 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted P-loop-containing kinase
L2_013_000G1_scaffold_2173_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1487..2401)
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S887_9FIRM
L2_013_000G1_scaffold_2173_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(2422..3177)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R1Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42873.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L2_013_000G1_scaffold_2173_5
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3328..3684)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=2 Tax=Lachnospiraceae RepID=C9LAE0_BLAHA
Stage V sporulation protein AE {ECO:0000313|EMBL:EEX20938.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
stage V sporulation protein AE
L2_013_000G1_scaffold_2173_6
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(3696..4709)
DNA (1014bp) protein (338aa)
Stage V sporulation protein AD n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WC02_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDC91747.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
stage V sporulation protein AD
L2_013_000G1_scaffold_2173_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(4709..5179)
DNA (471bp) protein (157aa)
Stage V sporulation protein AC n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RC48_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CDC42884.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
stage V sporulation AC, SpoVAC
L2_013_000G1_scaffold_2173_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(5233..5643)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RIN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42886.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_2173_9
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5640..6269)
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LAE4_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG79960.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Stage V sporulation protein AA.
L2_013_000G1_scaffold_2173_10
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6376..7089)
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=3 Tax=Lachnospiraceae RepID=C9LAE5_BLAHA
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, sigma-B/F/G subfamily
L2_013_000G1_scaffold_2173_11
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7098..7541)
DNA (444bp) protein (148aa)
Anti-sigma F factor n=3 Tax=Lachnospiraceae RepID=C9LAE6_BLAHA
Anti-sigma F factor {ECO:0000313|EMBL:EGG79962.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
putative anti-sigma regulatory factor, serine/threonine protein kinase
L2_013_000G1_scaffold_2173_12
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7554..7889)
DNA (336bp) protein (112aa)
Anti-sigma factor antagonist n=2 Tax=Lachnospiraceae RepID=C9LAE7_BLAHA
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
anti-sigma factor antagonist
L2_013_000G1_scaffold_2173_13
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8023..9519)
DNA (1497bp) protein (499aa)
Putative tetratricopeptide repeat-containing domain protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NJ04_9FIRM
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:CDC08339.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Tetratricopeptide repeat.
L2_013_000G1_scaffold_2173_14
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9531..9680)
DNA (150bp) protein (50aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LAF0_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20948.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_013_000G1_scaffold_2173_15
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9673..10974)
DNA (1302bp) protein (434aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R202_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79966.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L2_013_000G1_scaffold_2173_16
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11208..13331)
DNA (2124bp) protein (708aa)
Arylsulfatase {ECO:0000313|EMBL:EEX20950.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEX20950.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Arylsulfatase n=2 Tax=Lachnospiraceae RepID=C9LAF2_BLAHA
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L2_013_000G1_scaffold_2173_17
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13375..16020)
DNA (2646bp) protein (882aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N8H4_9FIRM
L2_013_000G1_scaffold_2173_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16568..17620
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ACG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79969.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
endonuclease/Exonuclease/phosphatase family protein
L2_013_000G1_scaffold_2173_19
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17624..19018)
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J350_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS25627.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
MATE efflux family protein
L2_013_000G1_scaffold_2173_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(19816..20031)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42900.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Small, acid-soluble spore proteins, alpha/beta type.
L2_013_000G1_scaffold_2173_21
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20159..20344)
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=R6N899_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79973.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Putative stress-responsive transcriptional regulator
L2_013_000G1_scaffold_2173_22
unknown

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comp(20360..20431)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 22 items

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