ggKbase home page

L2_013_000G1_scaffold_2260

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2260_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


172..546
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=3 Tax=Lachnospiraceae RepID=C9L9H5_BLAHA
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
LSU ribosomal protein L12P
L2_013_000G1_scaffold_2260_2
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1018..2490
DNA (1473bp) protein (491aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BV56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59480.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
carbon starvation protein
L2_013_000G1_scaffold_2260_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

2807..6658
DNA (3852bp) protein (1284aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RG96_9FIRM
L2_013_000G1_scaffold_2260_4
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6676..10380
DNA (3705bp) protein (1235aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Lachnospiraceae RepID=C9L9I2_BLAHA
L2_013_000G1_scaffold_2260_5
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10484..12076
DNA (1593bp) protein (531aa)
Response regulator receiver domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ19_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG75097.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
two component transcriptional regulator, AraC family
L2_013_000G1_scaffold_2260_6
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12073..13851
DNA (1779bp) protein (593aa)
HAMP domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ18_9CLOT
HAMP domain protein {ECO:0000313|EMBL:EEG75096.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
multi-sensor signal transduction histidine kinase
L2_013_000G1_scaffold_2260_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13841..15118
DNA (1278bp) protein (426aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ17_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG75095.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
sugar ABC transporter periplasmic protein
L2_013_000G1_scaffold_2260_8
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15237..16541
DNA (1305bp) protein (435aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ16_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG75094.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_013_000G1_scaffold_2260_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16615..17457
DNA (843bp) protein (281aa)
ABC transporter, permease protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ15_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG75093.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
carbohydrate ABC transporter membrane protein 1
L2_013_000G1_scaffold_2260_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17458..18297
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WJR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07084.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_013_000G1_scaffold_2260_11
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18574..18987
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=2 Tax=Blautia RepID=C0CL70_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
30S ribosomal protein S12
L2_013_000G1_scaffold_2260_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists


19198..19668
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RNF1_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
30S ribosomal protein S7
Displaying 12 items

View Taxonomy