ggKbase home page

L2_013_000G1_scaffold_2460

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2460_1
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123..1178)
DNA (1056bp) protein (352aa)
Peptidase M56 BlaR1 n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N9H6_9FIRM
Peptidase M56 BlaR1 {ECO:0000313|EMBL:CDC08693.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
L2_013_000G1_scaffold_2460_2
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1178..1570)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PG06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC08692.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
penicillinase repressor
L2_013_000G1_scaffold_2460_3
unknown

Not on your lists

comp(1545..2291)
DNA (747bp) protein (249aa)

This feature has no annotations

L2_013_000G1_scaffold_2460_4
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2288..2665)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79754.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L2_013_000G1_scaffold_2460_5
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2690..3541)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IX44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26479.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
sugar permease
L2_013_000G1_scaffold_2460_6
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(3507..4388)
DNA (882bp) protein (294aa)
ABC-type sugar transport system permease component n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y184_9FIRM
ABC-type sugar transport system permease component {ECO:0000313|EMBL:CDD27565.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
binding-protein-dependent transport systems inner membrane component
L2_013_000G1_scaffold_2460_7
unknown

Not on your lists

comp(4419..5768)
DNA (1350bp) protein (450aa)

This feature has no annotations

L2_013_000G1_scaffold_2460_8
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6504..7373)
DNA (870bp) protein (290aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Lachnospiraceae RepID=C9LA63_BLAHA
phosphoribosylaminoimidazole-succinocarboxamide synthase
L2_013_000G1_scaffold_2460_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7478..7696)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KD41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38741.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_013_000G1_scaffold_2460_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7693..7944)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76313.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
AcrR; transcriptional regulator
L2_013_000G1_scaffold_2460_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(7956..9755)
DNA (1800bp) protein (600aa)
Beta-glucuronidase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5G3_9FIRM
Beta-glucuronidase {ECO:0000313|EMBL:CCZ35833.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
glycoside hydrolase
L2_013_000G1_scaffold_2460_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(9795..14345)
DNA (4551bp) protein (1517aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
DNA polymerase III polC-type n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RVW6_9FIRM
DNA polymerase III subunit alpha
L2_013_000G1_scaffold_2460_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14365..15417)
DNA (1053bp) protein (351aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LA72_BLAHA
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_013_000G1_scaffold_2460_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(15447..16589)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47180.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
toxic anion resistance family protein
L2_013_000G1_scaffold_2460_15
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16593..17861)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LA74_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC08268.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L2_013_000G1_scaffold_2460_16
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

18057..18374
DNA (318bp) protein (106aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain amino acid aminotransferase group II n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VFZ5_9FIRM
Branched-chain amino acid aminotransferase group II {ECO:0000313|EMBL:CDC93074.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Displaying 16 items

View Taxonomy