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L2_013_000G1_scaffold_1083

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1083_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..269)
DNA (267bp) protein (89aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=4 Tax=Roseburia RepID=D4KJM9_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDA56044.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_013_000G1_scaffold_1083_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(282..1241)
DNA (960bp) protein (320aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGP2_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC42176.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_013_000G1_scaffold_1083_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(1326..2996)
DNA (1671bp) protein (557aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R012_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC42178.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_013_000G1_scaffold_1083_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(3134..4723)
DNA (1590bp) protein (530aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2H7_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CDC42180.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_013_000G1_scaffold_1083_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(4698..6512)
DNA (1815bp) protein (605aa)
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Predicted signal transduction protein with a C-terminal ATPase domain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S691_9FIRM
Predicted signal transduction protein with a C-terminal ATPase domain {ECO:0000313|EMBL:CDC42182.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1083_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6542..6808)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BDZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70410.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein DUF1703
L2_013_000G1_scaffold_1083_7
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7024..8916)
DNA (1893bp) protein (631aa)
ABC transporter n=5 Tax=Clostridiales RepID=E5XK13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82660.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_013_000G1_scaffold_1083_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8909..10642)
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM65_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA82876.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L2_013_000G1_scaffold_1083_9
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10635..11138)
DNA (504bp) protein (168aa)
Transcriptional regulator, MarR family n=3 Tax=Lachnospiraceae RepID=C9L427_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC07859.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Transcriptional regulators
L2_013_000G1_scaffold_1083_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(11352..13157)
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R672_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43475.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
creatinase
L2_013_000G1_scaffold_1083_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(13231..15375)
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43474.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Transcriptional accessory protein
L2_013_000G1_scaffold_1083_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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15518..16144
DNA (627bp) protein (209aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R3J2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC43473.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1083_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(16141..16566)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43059.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Protein of unknown function (DUF2752).
L2_013_000G1_scaffold_1083_14
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

16661..17419
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R571_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43060.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted integral membrane protein
L2_013_000G1_scaffold_1083_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(17476..18678)
DNA (1203bp) protein (401aa)
phosphoglycerate mutase n=1 Tax=Blautia producta RepID=UPI00037D5F6E
Proposed homoserine kinase {ECO:0000313|EMBL:CDC43063.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
proposed homoserine kinase
L2_013_000G1_scaffold_1083_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(18692..19909)
DNA (1218bp) protein (406aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RCQ5_9FIRM
L2_013_000G1_scaffold_1083_17
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19925..20446)
DNA (522bp) protein (174aa)
ACT domain-containing protein (EC:5.4.99.5)
UPF0735 ACT domain-containing protein BLAHAN_04077 n=2 Tax=Lachnospiraceae RepID=C9L406_BLAHA
UPF0735 ACT domain-containing protein BLAHAN_04077 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L2_013_000G1_scaffold_1083_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20447..21565)
DNA (1119bp) protein (373aa)
Peptide chain release factor 2 n=2 Tax=Lachnospiraceae RepID=C9L407_BLAHA
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L2_013_000G1_scaffold_1083_19
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21583..21822)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C9L408_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX23099.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_013_000G1_scaffold_1083_20
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21999..24572)
DNA (2574bp) protein (858aa)
Protein translocase subunit SecA n=2 Tax=Lachnospiraceae RepID=C9L409_BLAHA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
protein translocase subunit secA
L2_013_000G1_scaffold_1083_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24813..27080)
DNA (2268bp) protein (756aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
C7D2-BG protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R496_9FIRM
C7D2-BG protein {ECO:0000313|EMBL:CDC43743.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1083_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(27344..27877)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R580_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43070.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
SSU ribosomal protein S30P/sigma 54 modulation protein
L2_013_000G1_scaffold_1083_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28180..28449)
DNA (270bp) protein (90aa)
Putative lipoprotein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJ82_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CDC43071.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1083_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(28586..29350)
DNA (765bp) protein (255aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S8W8_9FIRM
L2_013_000G1_scaffold_1083_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29390..30280)
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6PLQ2_9FIRM
L2_013_000G1_scaffold_1083_26
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30335..30823)
DNA (489bp) protein (163aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NQJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10654.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L2_013_000G1_scaffold_1083_27
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30953..31579)
DNA (627bp) protein (209aa)
Single-strand binding family protein n=3 Tax=Lachnospiraceae RepID=C9L417_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG79799.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Single-stranded DNA-binding protein
L2_013_000G1_scaffold_1083_28
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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31834..33663
DNA (1830bp) protein (610aa)
GTP-binding protein TypA n=2 Tax=Lachnospiraceae RepID=C9L401_BLAHA
GTP-binding protein TypA {ECO:0000313|EMBL:EEX23108.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
GTP-binding protein TypA/BipA
L2_013_000G1_scaffold_1083_29
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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34204..35508
DNA (1305bp) protein (435aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Aldehyde-alcohol dehydrogenase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RG12_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Displaying 29 items

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