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L2_013_000G1_scaffold_1188

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1188_1
Hymenolepis microstoma, Hymenolepis, Cyclophyllidea, Eucestoda, Platyhelminthes, Metazoa

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comp(3..437)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036E5D9A
Collagen alpha 1(V) chain {ECO:0000313|EMBL:CDI95728.1}; TaxID=85433 species="Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Hymenolepididae; Hymenolepis.;" source="Hymenolepis microstoma (Rodent tapeworm) (Rodentolepis microstoma).;"
phage-related tail-host interaction protein
L2_013_000G1_scaffold_1188_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(449..1345)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037CF073
Collagen triple helix repeat protein {ECO:0000313|EMBL:EHM54361.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
collagen-like protein
L2_013_000G1_scaffold_1188_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1359..2120)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00059.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_013_000G1_scaffold_1188_4
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2133..2759)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036E4578
Uncharacterized protein {ECO:0000313|EMBL:CDB76569.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
L2_013_000G1_scaffold_1188_5
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2756..3568)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79591.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
collagen triple helix repeat-containing protein
L2_013_000G1_scaffold_1188_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3579..4565)
DNA (987bp) protein (329aa)
Bacteriophage peptidoglycan hydrolase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UG75_9FIRM
Bacteriophage peptidoglycan hydrolase {ECO:0000313|EMBL:CCZ67827.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Bacteriophage peptidoglycan hydrolase.
L2_013_000G1_scaffold_1188_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4565..6721)
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035F39AA
phage minor structural protein, N-terminal region
Phage minor structural protein, N-terminal region {ECO:0000313|EMBL:CBL26412.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_013_000G1_scaffold_1188_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6718..7443)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67829.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phage putative tail component, N-terminal domain
L2_013_000G1_scaffold_1188_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7436..9637)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67830.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phage-like protein
L2_013_000G1_scaffold_1188_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10000..10227)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67831.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_000G1_scaffold_1188_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10173..10592)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UG82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67832.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_000G1_scaffold_1188_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10589..11296)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67833.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phage major tail protein, phi13 family
L2_013_000G1_scaffold_1188_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11407..11727)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67834.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_000G1_scaffold_1188_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11724..12104)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67835.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
prophage pi2 protein 37
L2_013_000G1_scaffold_1188_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12097..12444)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67836.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_013_000G1_scaffold_1188_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12431..12730)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UG86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67837.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_000G1_scaffold_1188_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12737..14185)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67838.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_013_000G1_scaffold_1188_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14203..14913)
DNA (711bp) protein (237aa)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWY1_9FIRM
ATP-dependent Clp protease proteolytic subunit {ECO:0000313|EMBL:CCZ67839.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
peptidase S14 ClpP
L2_013_000G1_scaffold_1188_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14961..16067)
DNA (1107bp) protein (369aa)
Phage portal protein HK97 family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ78_9FIRM
Phage portal protein HK97 family {ECO:0000313|EMBL:CCZ67840.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phage portal protein, HK97 family
L2_013_000G1_scaffold_1188_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16155..17828)
DNA (1674bp) protein (558aa)
Terminase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9I9_9FIRM
Terminase {ECO:0000313|EMBL:CCZ67841.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
terminase
L2_013_000G1_scaffold_1188_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17825..18142)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5F9_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03365.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_1188_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18441..18878)
DNA (438bp) protein (146aa)
Phage related protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPY3_9FIRM
Phage related protein {ECO:0000313|EMBL:CCZ67843.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
phage-like protein
L2_013_000G1_scaffold_1188_23
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18923..19339)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P7A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ05671.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_013_000G1_scaffold_1188_24
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19392..19562)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B5788C
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48211.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
YcfA-like protein.
L2_013_000G1_scaffold_1188_25
unknown

Not on your lists

comp(19641..20054)
DNA (414bp) protein (138aa)

This feature has no annotations

L2_013_000G1_scaffold_1188_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(20190..20663)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RNZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47024.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_1188_27
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20669..20842)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NXR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11026.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L2_013_000G1_scaffold_1188_28
unknown

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comp(20998..21180)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_013_000G1_scaffold_1188_29
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21212..21382)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R0BG20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98720.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L2_013_000G1_scaffold_1188_30
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21403..21636)
DNA (234bp) protein (78aa)
Gp78 n=1 Tax=Mycobacterium phage Dori RepID=G8I4T5_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:ETT46573.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
Displaying items 1-30 of 52 in total

View Taxonomy