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L2_013_000G1_scaffold_1759

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1759_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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695..2623
DNA (1929bp) protein (643aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=3 Tax=Clostridiales RepID=A7AZB5_RUMGN
L2_013_000G1_scaffold_1759_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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2695..3012
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RYW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC48281.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_1759_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3083..4357)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9Y7C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58522.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
two-component system, response regulator YesN
L2_013_000G1_scaffold_1759_4
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4527..5921
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PFG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23082.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
glycoside/pentoside/hexuronide:cation symporter, GPH family
L2_013_000G1_scaffold_1759_5
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6041..7846
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37919.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Glycoside Hydrolase Family 2 candidate b-glucuronidase
L2_013_000G1_scaffold_1759_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7904..9166)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45780.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
two-component sensor histidine kinase
L2_013_000G1_scaffold_1759_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9186..9887)
DNA (702bp) protein (234aa)
Putative two-component response regulator n=1 Tax=Clostridium sp. D5 RepID=F0Z3I7_9CLOT
Putative two-component response regulator {ECO:0000313|EMBL:EGB91251.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Two-component response regulator
L2_013_000G1_scaffold_1759_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10142..10897
DNA (756bp) protein (252aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHE7_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS06024.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC transporter ATP-binding protein
L2_013_000G1_scaffold_1759_9
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10854..13001
DNA (2148bp) protein (716aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3I5_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EGB91249.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter permease
L2_013_000G1_scaffold_1759_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13161..14189
DNA (1029bp) protein (343aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris CC59_002D RepID=V8C9M2_9FIRM
CAAX amino terminal protease family.
Uncharacterized protein {ECO:0000313|EMBL:ETD23715.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L2_013_000G1_scaffold_1759_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14422..15816)
DNA (1395bp) protein (465aa)
Transporter n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3APT7_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Na+-dependent transporter
L2_013_000G1_scaffold_1759_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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16179..16673
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SNU1_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
bacterial translation initiation factor 3 (bIF-3)
L2_013_000G1_scaffold_1759_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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16713..16901
DNA (189bp) protein (63aa)
50S ribosomal protein L35 n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RKI9_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
LSU ribosomal protein L35P
L2_013_000G1_scaffold_1759_14
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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16964..17320
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VFW6_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
50S ribosomal protein L20
L2_013_000G1_scaffold_1759_15
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17951..19330
DNA (1380bp) protein (460aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBM9_BLAHA
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
RnfABCDGE type electron transport complex subunit C
L2_013_000G1_scaffold_1759_16
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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19327..20274
DNA (948bp) protein (316aa)
Electron transport complex, RnfABCDGE type, D subunit n=2 Tax=Lachnospiraceae RepID=C9LBM8_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG84087.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
nfoD; NfoD
L2_013_000G1_scaffold_1759_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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20286..21581
DNA (1296bp) protein (432aa)
Putative FMN-binding domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RSE9_9FIRM
Putative FMN-binding domain protein {ECO:0000313|EMBL:CDC48269.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_1759_18
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21600..22370
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3ADQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84085.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L2_013_000G1_scaffold_1759_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22479..23513)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PK05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23870.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ApbE family lipoprotein
L2_013_000G1_scaffold_1759_20
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

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23656..23940
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:308 RepID=R7A632_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD50949.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
Displaying 20 items

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