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L2_013_000G1_scaffold_1912

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1912_1
unknown

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3..77
DNA (75bp) protein (25aa)

This feature has no annotations

L2_013_000G1_scaffold_1912_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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74..538
DNA (465bp) protein (155aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SFR4_9FIRM
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CDC45462.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1912_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(551..1246)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45464.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
xylanase
L2_013_000G1_scaffold_1912_4
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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1344..2012
DNA (669bp) protein (223aa)
Transcriptional regulator, Crp/Fnr family n=3 Tax=Lachnospiraceae RepID=C9L3U6_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC06952.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_013_000G1_scaffold_1912_5
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2123..2431)
DNA (309bp) protein (103aa)
Thioredoxin n=2 Tax=Lachnospiraceae RepID=F3AFU2_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
thioredoxin
L2_013_000G1_scaffold_1912_6
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2640..3509)
DNA (870bp) protein (290aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Blautia producta RepID=UPI0003731F2B
Uncharacterized protein {ECO:0000313|EMBL:EGG82903.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L2_013_000G1_scaffold_1912_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3687..4427
DNA (741bp) protein (247aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent deacetylase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RET7_9FIRM
NAD-dependent deacetylase {ECO:0000313|EMBL:CDC46330.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1912_8
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5046..5618
DNA (573bp) protein (191aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=2 Tax=Lachnospiraceae RepID=C9L3U2_BLAHA
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L2_013_000G1_scaffold_1912_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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5675..5887
DNA (213bp) protein (71aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0 C subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RET2_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1912_10
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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5928..6428
DNA (501bp) protein (167aa)
ATP synthase F0 subcomplex B subunit (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6SI70_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1912_11
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6409..6912
DNA (504bp) protein (168aa)
ATP synthase, F1 delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AFT7_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L2_013_000G1_scaffold_1912_12
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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6918..8426
DNA (1509bp) protein (503aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ATP synthase subunit alpha n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLW8_9FIRM
ATP synthase F1 subunit alpha
L2_013_000G1_scaffold_1912_13
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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8431..9321
DNA (891bp) protein (297aa)
ATP synthase, F1 gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RT81_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1912_14
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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9352..10743
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
F0F1 ATP synthase subunit beta n=1 Tax=Blautia producta RepID=UPI00037A6797
F-type H+-transporting ATPase subunit beta
L2_013_000G1_scaffold_1912_15
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10757..11167
DNA (411bp) protein (137aa)
ATP synthase epsilon chain n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L3S2_BLAHA
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
F0F1-type ATP synthase subunit epsilon
L2_013_000G1_scaffold_1912_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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11520..12035
DNA (516bp) protein (172aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLV9_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDC46304.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_013_000G1_scaffold_1912_17
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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12147..13160
DNA (1014bp) protein (338aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=Lachnospiraceae RepID=C9L6F8_BLAHA
L2_013_000G1_scaffold_1912_18
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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13440..14207
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N2S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77318.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_013_000G1_scaffold_1912_19
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14200..15135
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYM7_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98124.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_013_000G1_scaffold_1912_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(15265..16176)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RLV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46299.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
carbonate dehydratase
L2_013_000G1_scaffold_1912_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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16474..17742
DNA (1269bp) protein (423aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RT66_9FIRM
L2_013_000G1_scaffold_1912_22
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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17756..18247
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RBK2_9FIRM
L2_013_000G1_scaffold_1912_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18292..19077)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WKW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07529.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_013_000G1_scaffold_1912_24
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19074..19955)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K456_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41026.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_013_000G1_scaffold_1912_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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20093..20761
DNA (669bp) protein (223aa)
DNA-binding response regulator YycF n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RD09_9FIRM
DNA-binding response regulator YycF {ECO:0000313|EMBL:CDC43184.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
transcriptional regulator
L2_013_000G1_scaffold_1912_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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20765..21616
DNA (852bp) protein (284aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R2T0_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_013_000G1_scaffold_1912_27
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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21735..22397
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43181.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
ABC transporter ATP-binding protein
L2_013_000G1_scaffold_1912_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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22403..22627
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R5G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43180.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Displaying 28 items

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