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L2_013_000G1_scaffold_1989

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1989_1
unknown

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comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

L2_013_000G1_scaffold_1989_2
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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225..1388
DNA (1164bp) protein (388aa)
Trigger factor n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7T7_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
L2_013_000G1_scaffold_1989_3
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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1439..3553
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RF38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43944.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_013_000G1_scaffold_1989_4
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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3501..4736
DNA (1236bp) protein (412aa)
Metallo-beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4S8_9FIRM
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDC43943.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_1989_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4945..5406
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium RepID=D3AMH1_9CLOT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFC96986.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
MarR family transcriptional regulator
L2_013_000G1_scaffold_1989_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5396..6799
DNA (1404bp) protein (468aa)
Major facilitator superfamily protein permease n=3 Tax=Streptococcus gallolyticus RepID=F0VTD1_STRG2
MFS transporter
MFS transporter {ECO:0000313|EMBL:CDM67559.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_013_000G1_scaffold_1989_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6897..8570
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036AC775
Uncharacterized protein {ECO:0000313|EMBL:EHI59086.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein DUF1703
L2_013_000G1_scaffold_1989_8
unknown

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8595..8732
DNA (138bp) protein (46aa)

This feature has no annotations

L2_013_000G1_scaffold_1989_9
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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8823..9305
DNA (483bp) protein (161aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ILD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22618.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L2_013_000G1_scaffold_1989_10
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9475..10665
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MHI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70166.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_013_000G1_scaffold_1989_11
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10655..11386
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6L5I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB69487.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
L2_013_000G1_scaffold_1989_12
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11405..12070)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61837.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
nitroreductase family protein
L2_013_000G1_scaffold_1989_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12165..12533)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RMI4_9FIRM
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EDS18671.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative transcriptional regulator
L2_013_000G1_scaffold_1989_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12724..13308
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003661A93
Putative RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDG02293.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
RNA polymerase sigma-70 factor
L2_013_000G1_scaffold_1989_15
unknown

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13292..14371
DNA (1080bp) protein (360aa)

This feature has no annotations

L2_013_000G1_scaffold_1989_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14450..15145
DNA (696bp) protein (232aa)
Cyclic nucleotide-binding protein n=1 Tax=Clostridium botulinum (strain Kyoto / Type A2) RepID=C1FQX5_CLOBJ
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ACO85469.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L2_013_000G1_scaffold_1989_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15296..17212
DNA (1917bp) protein (639aa)
NADH oxidase (EC:1.-.-.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZA0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20147.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_013_000G1_scaffold_1989_18
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17241..19136
DNA (1896bp) protein (632aa)
PTS system beta-glucoside-specific IIABC component n=1 Tax=Clostridium sp. CAG:411 RepID=R7I7N3_9CLOT
PTS system beta-glucoside-specific IIABC component {ECO:0000313|EMBL:CDE47635.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
PTS beta-glucoside transporter subunit IIABC
L2_013_000G1_scaffold_1989_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19153..20568
DNA (1416bp) protein (472aa)
6-phospho-beta-glucosidase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEC9_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EHF00177.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
glycoside hydrolase family protein
L2_013_000G1_scaffold_1989_20
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20558..21541
DNA (984bp) protein (328aa)
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Dehydrogenase n=1 Tax=Clostridium intestinale URNW RepID=U2PW82_9CLOT
Dehydrogenase {ECO:0000313|EMBL:ERK30710.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L2_013_000G1_scaffold_1989_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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21613..21963
DNA (351bp) protein (117aa)
Putative AP endonuclease family 2 n=1 Tax=Dorea sp. CAG:105 RepID=R5D631_9FIRM
Putative AP endonuclease family 2 {ECO:0000313|EMBL:CCX75613.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
xylose isomerase domain-containing protein TIM barrel
Displaying 21 items

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