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L2_013_000G1_scaffold_3173

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_3173_1
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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41..1126
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK58_9CLOT
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KJJ74536.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_013_000G1_scaffold_3173_2
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1198..1689
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RBC7_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK79657.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L2_013_000G1_scaffold_3173_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1707..3188
DNA (1482bp) protein (494aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HK56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98156.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_013_000G1_scaffold_3173_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3656..4417
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57781.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_013_000G1_scaffold_3173_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4441..5397
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK51_9CLOT
L2_013_000G1_scaffold_3173_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5409..6152
DNA (744bp) protein (248aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK50_9CLOT
hypothetical protein
L2_013_000G1_scaffold_3173_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6217..7371
DNA (1155bp) protein (385aa)
cysteine desulfurase (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42899.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_013_000G1_scaffold_3173_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7404..8597
DNA (1194bp) protein (398aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1J6_9CLOT
thiamine biosynthesis/tRNA modification protein ThiI
L2_013_000G1_scaffold_3173_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8655..8888)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CX15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56373.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
PTS system phosphocarrier protein HPr
L2_013_000G1_scaffold_3173_10
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9051..10364
DNA (1314bp) protein (438aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme n=2 Tax=Clostridium RepID=D6DKS8_CLOSC
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFE13753.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_013_000G1_scaffold_3173_11
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10456..10716
DNA (261bp) protein (87aa)
UPF0297 protein Closa_0892 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R677_CLOSW
hypothetical protein
UPF0297 protein IO98_11040 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
L2_013_000G1_scaffold_3173_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10940..11347
DNA (408bp) protein (136aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK42_9CLOT
Holliday junction resolvase YqgF
L2_013_000G1_scaffold_3173_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11372..11647
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58105.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_000G1_scaffold_3173_14
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11661..12146
DNA (486bp) protein (162aa)
Ferric uptake regulator, Fur family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R680_CLOSW
Fur family transcriptional regulator {ECO:0000313|EMBL:KEZ90030.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ferric uptake regulator family protein
L2_013_000G1_scaffold_3173_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12143..13822
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58103.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
RNA-metabolising metallo-beta-lactamase
L2_013_000G1_scaffold_3173_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13868..14269
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XID6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95401.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
aminodeoxychorismate lyase
L2_013_000G1_scaffold_3173_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14256..14396
DNA (141bp) protein (47aa)
O-methyltransferase n=4 Tax=Clostridium RepID=E9SNE1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07261.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted O-methyltransferase
Displaying 17 items

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