ggKbase home page

L2_013_000G1_scaffold_3252

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_3252_1
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(97..441)
DNA (345bp) protein (115aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXY4_SPHGB
ABC transporter inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKN64159.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
L2_013_000G1_scaffold_3252_2
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

632..1321
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IAI6_9CLOT
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KFN08571.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
LuxR family transcriptional regulator
L2_013_000G1_scaffold_3252_3
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1710..2627
DNA (918bp) protein (306aa)
AP endonuclease family 2 n=1 Tax=Clostridium sp. CAG:149 RepID=R5MLT8_9CLOT
AP endonuclease {ECO:0000313|EMBL:KEZ90646.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Sugar phosphate isomerases/epimerases
L2_013_000G1_scaffold_3252_4
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2608..3393
DNA (786bp) protein (262aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. M62/1 RepID=D4CC10_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EFE12756.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
HAD-superfamily hydrolase, subfamily IIB
L2_013_000G1_scaffold_3252_5
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

3406..4155
DNA (750bp) protein (250aa)
Purine or other phosphorylase family 1 n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AN42_SEBTE
purine or other phosphorylase family 1
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:ACZ07418.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_013_000G1_scaffold_3252_6
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4172..4966
DNA (795bp) protein (265aa)
GntR family transcriptional regulator n=1 Tax=Anoxybacillus flavithermus NBRC 109594 RepID=R4G1E3_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KEZ90283.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
GntR family transcriptional regulator
L2_013_000G1_scaffold_3252_7
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4929..5777
DNA (849bp) protein (283aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MPB0_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL35596.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L2_013_000G1_scaffold_3252_8
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5779..6645
DNA (867bp) protein (289aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5ML39_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCY85971.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA
L2_013_000G1_scaffold_3252_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6645..7469
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC08_9CLOT
ABC transporter permease {ECO:0000313|EMBL:KEZ90647.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC-type sugar transport system, permease component
L2_013_000G1_scaffold_3252_10
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7529..8908
DNA (1380bp) protein (460aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC07_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFE12753.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ABC-type sugar transport system, periplasmic component
L2_013_000G1_scaffold_3252_11
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9203..10390
DNA (1188bp) protein (396aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541, ECO:0000313|EMBL:CBL40943.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
S-adenosylmethionine synthase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT01_9FIRM
L2_013_000G1_scaffold_3252_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10453..12087
DNA (1635bp) protein (545aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM52_9CLOT
integral membrane sensor signal transduction histidine kinase
L2_013_000G1_scaffold_3252_13
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12080..12769
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R1F9_CLOSW
Transcriptional regulator {ECO:0000313|EMBL:KEZ87826.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
winged helix family two component transcriptional regulator
L2_013_000G1_scaffold_3252_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13236..14072
DNA (837bp) protein (279aa)
MATE efflux family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CWB0_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI71566.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative efflux protein, MATE family
Displaying 14 items

View Taxonomy