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L2_013_000G1_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_396_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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155..289
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3S5_CLOSW
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_396_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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388..732
DNA (345bp) protein (115aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Ribonuclease P protein component n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT05_9CLOT
ribonuclease P protein component
L2_013_000G1_scaffold_396_3
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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998..2299
DNA (1302bp) protein (434aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3S2_CLOSW
YidC/Oxa1 family membrane protein insertase {ECO:0000313|EMBL:KEZ86772.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
YidC/Oxa1 family membrane protein insertase
L2_013_000G1_scaffold_396_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2314..3234
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I929_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61568.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
spoIIIJ-associated protein
L2_013_000G1_scaffold_396_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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3321..4697
DNA (1377bp) protein (459aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I930_9CLOT
tRNA modification GTPase TrmE
L2_013_000G1_scaffold_396_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4711..6579
DNA (1869bp) protein (623aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T115_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glucose inhibited division protein A
L2_013_000G1_scaffold_396_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6592..7320
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I932_9CLOT
methyltransferase GidB
L2_013_000G1_scaffold_396_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7589..8539)
DNA (951bp) protein (317aa)
Alpha/beta hydrolase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WSR6_9CLOT
Alpha/beta hydrolase {ECO:0000313|EMBL:ENY90577.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
alpha/beta fold family hydrolase
L2_013_000G1_scaffold_396_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8839..9609
DNA (771bp) protein (257aa)
Chromosome partitioning protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X4E0_9CLOT
Chromosome partitioning protein {ECO:0000313|EMBL:ENY90576.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
chromosome partitioning protein
L2_013_000G1_scaffold_396_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9609..10544
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I935_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61574.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
parB-like partition protein
L2_013_000G1_scaffold_396_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10568..11068
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I936_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61575.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_000G1_scaffold_396_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11255..11839)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X3T4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90563.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
BioY protein
L2_013_000G1_scaffold_396_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12218..13552
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWS6_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Glu/Leu/Phe/Val dehydrogenase
L2_013_000G1_scaffold_396_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13649..14536
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R3Q7_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06778.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_396_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15030..17045
DNA (2016bp) protein (672aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZK3_9CLOT
hypothetical protein
L2_013_000G1_scaffold_396_16
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17035..17754
DNA (720bp) protein (240aa)
Response regulator receiver domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZK4_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG55539.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_013_000G1_scaffold_396_17
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17795..21226
DNA (3432bp) protein (1144aa)
Ig-like domain-containing surface protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W942_DESOD
Ig-like domain-containing surface protein {ECO:0000313|EMBL:AET68683.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
Ig-like domain-containing surface protein
L2_013_000G1_scaffold_396_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21386..22390
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T9Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60009.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
diguanylate cyclase (GGDEF) domain
L2_013_000G1_scaffold_396_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22601..25501
DNA (2901bp) protein (967aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FC05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97731.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Signal transduction histidine kinase
L2_013_000G1_scaffold_396_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25513..26805
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z1M6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13942.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
UgpB; sugar-binding periplasmic protein/domain
L2_013_000G1_scaffold_396_21
unknown

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comp(26676..26927)
DNA (252bp) protein (84aa)

This feature has no annotations

L2_013_000G1_scaffold_396_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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27109..27732
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61791.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_013_000G1_scaffold_396_23
unknown

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27954..29087
DNA (1134bp) protein (378aa)

This feature has no annotations

L2_013_000G1_scaffold_396_24
unknown

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29126..30247
DNA (1122bp) protein (374aa)

This feature has no annotations

L2_013_000G1_scaffold_396_25
unknown

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30298..30792
DNA (495bp) protein (165aa)

This feature has no annotations

L2_013_000G1_scaffold_396_26
unknown

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30811..32199
DNA (1389bp) protein (463aa)

This feature has no annotations

L2_013_000G1_scaffold_396_27
unknown

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32252..33205
DNA (954bp) protein (318aa)

This feature has no annotations

L2_013_000G1_scaffold_396_28
unknown

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33189..34022
DNA (834bp) protein (278aa)

This feature has no annotations

L2_013_000G1_scaffold_396_29
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34029..36068
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034B23DE
hypothetical protein
Molecular chaperone-like protein {ECO:0000313|EMBL:CDE46487.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L2_013_000G1_scaffold_396_30
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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36086..38158
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LWC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHM51893.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
ATPase central domain-containing protein
Displaying items 1-30 of 53 in total

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