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L2_013_000G1_scaffold_484

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_484_1
unknown

Not on your lists

1..108
DNA (108bp) protein (36aa)

This feature has no annotations

L2_013_000G1_scaffold_484_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(221..1126)
DNA (906bp) protein (302aa)
LysR substrate binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEP6_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEQ58292.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator
L2_013_000G1_scaffold_484_3
unknown

Not on your lists

1322..1495
DNA (174bp) protein (58aa)

This feature has no annotations

L2_013_000G1_scaffold_484_4
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1540..3183
DNA (1644bp) protein (548aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE1_9CLOT
Heme-binding protein A {ECO:0000313|EMBL:KJJ70644.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
dipeptide ABC transporter periplasmic protein
L2_013_000G1_scaffold_484_5
unknown

Not on your lists

3195..3407
DNA (213bp) protein (71aa)

This feature has no annotations

L2_013_000G1_scaffold_484_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3411..4760
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59756.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
glucose-inhibited division protein A
L2_013_000G1_scaffold_484_7
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5115..6107
DNA (993bp) protein (331aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
D-mannonate dehydratase (EC:4.2.1.8)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE0_9CLOT
L2_013_000G1_scaffold_484_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6104..7765
DNA (1662bp) protein (554aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE1_9CLOT
Heme-binding protein A {ECO:0000313|EMBL:KJJ70644.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
dipeptide ABC transporter periplasmic protein
L2_013_000G1_scaffold_484_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7814..8740)
DNA (927bp) protein (309aa)
LysR substrate binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEP6_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEQ58292.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator
L2_013_000G1_scaffold_484_10
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9049..9993
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE4_9CLOT
Glutathione transport system permease protein GsiC {ECO:0000313|EMBL:KJJ70641.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L2_013_000G1_scaffold_484_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10021..10872
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE3_9CLOT
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:KJJ70642.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
dipeptide/oligopeptide/nickel ABC transporter permease
L2_013_000G1_scaffold_484_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10888..12918
DNA (2031bp) protein (677aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99521.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
L2_013_000G1_scaffold_484_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12976..14631
DNA (1656bp) protein (552aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE1_9CLOT
Heme-binding protein A {ECO:0000313|EMBL:KJJ70644.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
dipeptide ABC transporter periplasmic protein
L2_013_000G1_scaffold_484_14
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14659..15639
DNA (981bp) protein (327aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
D-mannonate dehydratase (EC:4.2.1.8)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGE0_9CLOT
L2_013_000G1_scaffold_484_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15743..16912)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44299.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amidohydrolase
L2_013_000G1_scaffold_484_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16940..18340)
DNA (1401bp) protein (467aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZC15_9CLOT
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:CDD38471.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted membrane protein
L2_013_000G1_scaffold_484_17
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18454..19374)
DNA (921bp) protein (307aa)
LysR substrate binding domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C7H9_9CLOT
Transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EFE14517.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_013_000G1_scaffold_484_18
unknown

Not on your lists

comp(19844..20035)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_013_000G1_scaffold_484_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20164..20493)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036C0424
Uncharacterized protein {ECO:0000313|EMBL:EGN41612.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
conserved hypothetical protein (putative transposase or invertase)
L2_013_000G1_scaffold_484_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21423..23591
DNA (2169bp) protein (723aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CPT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD24553.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_013_000G1_scaffold_484_21
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24098..24778)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LLW4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB84539.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L2_013_000G1_scaffold_484_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24939..27164
DNA (2226bp) protein (742aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (Fragment) n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BRN3_CLOSY
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERI74483.1}; Flags: Fragment;; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Response regulator receiver domain.
L2_013_000G1_scaffold_484_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27262..28599
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45863.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
citrate transporter, CitMHS family
L2_013_000G1_scaffold_484_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28825..30627)
DNA (1803bp) protein (601aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97306.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L2_013_000G1_scaffold_484_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30805..32064
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SII5_CLOSY
Type III effector Hrp-dependent outer protein {ECO:0000313|EMBL:EGA95521.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_013_000G1_scaffold_484_26
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32077..33246
DNA (1170bp) protein (390aa)
Alcohol dehydrogenase, class IV n=3 Tax=Clostridiales RepID=D4MSX5_9FIRM
Alcohol dehydrogenase, class IV
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:CBL36861.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L2_013_000G1_scaffold_484_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33261..34154
DNA (894bp) protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMN3_9CLOT
L2_013_000G1_scaffold_484_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34204..35250
DNA (1047bp) protein (349aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SII8_CLOSY
L2_013_000G1_scaffold_484_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35253..36230
DNA (978bp) protein (326aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CBK93807.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CBK93807.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Phosphoglycerate dehydrogenase and related dehydrogenases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJL0_9FIRM
L2_013_000G1_scaffold_484_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36260..37324
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56986.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
Displaying items 1-30 of 59 in total

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