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L2_013_000G1_scaffold_864

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_864_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..866)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFJ1_9CLOT
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EXG85486.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein domain
L2_013_000G1_scaffold_864_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(870..1910)
DNA (1041bp) protein (347aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8K5_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG52341.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
oligopeptide/dipeptide ABC transporter ATPase
L2_013_000G1_scaffold_864_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1907..2758)
DNA (852bp) protein (284aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8K4_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EXG85484.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
binding-protein-dependent transport system inner membrane protein
L2_013_000G1_scaffold_864_4
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2772..3695)
DNA (924bp) protein (308aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8K3_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EXG85483.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_013_000G1_scaffold_864_5
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3755..5383)
DNA (1629bp) protein (543aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEE7_9FIRM
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EXG85482.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ABC transporter substrate-binding protein
L2_013_000G1_scaffold_864_6
unknown

Not on your lists

5464..5601
DNA (138bp) protein (46aa)

This feature has no annotations

L2_013_000G1_scaffold_864_7
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5724..6710)
DNA (987bp) protein (329aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N0N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76864.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L2_013_000G1_scaffold_864_8
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6737..8140)
DNA (1404bp) protein (468aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716, ECO:0000256|SAAS:SAAS00041637};; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
ABC-type sugar transport system, ATPase component n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WCG6_DESOD
sugar ABC transporter ATPase
L2_013_000G1_scaffold_864_9
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8173..9183)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9XM38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23837.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
integral membrane sensor signal transduction histidine kinase
L2_013_000G1_scaffold_864_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9180..10784)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90B1 RepID=N9YDZ2_9CLOT
Two component transcriptional regulator AraC family {ECO:0000313|EMBL:CCY42867.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AraC family transcriptional regulator
L2_013_000G1_scaffold_864_11
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11058..12770)
DNA (1713bp) protein (571aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZT2_CLOSW
Cell wall-binding protein {ECO:0000313|EMBL:KEZ89959.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
cell wall binding repeat-containing protein
L2_013_000G1_scaffold_864_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13205..14710
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58002.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
polysaccharide biosynthesis protein
L2_013_000G1_scaffold_864_13
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14796..16964)
DNA (2169bp) protein (723aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Helicase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0J8_CLOSW
helicase
L2_013_000G1_scaffold_864_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17146..18411)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67211.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_013_000G1_scaffold_864_15
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18781..20592
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA79479.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
hypothetical protein
L2_013_000G1_scaffold_864_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20660..21562
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVL4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44573.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_013_000G1_scaffold_864_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21913..22815
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T7J0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61533.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L2_013_000G1_scaffold_864_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22824..23093
DNA (270bp) protein (90aa)
Transcriptional regulator MerR family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TXG3_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCZ61532.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L2_013_000G1_scaffold_864_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(23206..23901)
DNA (696bp) protein (232aa)
Putative ATP synthase F1 delta subunit n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RN39_9FIRM
Putative ATP synthase F1 delta subunit {ECO:0000313|EMBL:CDC44461.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Crp/Fnr family transcriptional regulator
L2_013_000G1_scaffold_864_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24130..24978
DNA (849bp) protein (283aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NI23_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY96752.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L2_013_000G1_scaffold_864_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

24979..25425
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RGH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC44459.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L2_013_000G1_scaffold_864_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25450..26763
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96750.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
S-adenosylhomocysteine deaminase
L2_013_000G1_scaffold_864_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26790..27566
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AER7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99680.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L2_013_000G1_scaffold_864_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27598..28176)
DNA (579bp) protein (193aa)
Maf-like protein HMPREF1093_01178 n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XE82_9CLOT
Maf-like protein HMPREF1093_01178 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
maf protein
L2_013_000G1_scaffold_864_25
unknown

Not on your lists

28337..28621
DNA (285bp) protein (95aa)

This feature has no annotations

L2_013_000G1_scaffold_864_26
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28657..31419)
DNA (2763bp) protein (921aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GIV5_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35590.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_013_000G1_scaffold_864_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31678..32418)
DNA (741bp) protein (247aa)
Antibiotic ABC transporter permease n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W8M9_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter
L2_013_000G1_scaffold_864_28
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32411..33139)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKR5_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49622.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
ABC transporter ATP-binding protein
L2_013_000G1_scaffold_864_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33183..33965)
DNA (783bp) protein (261aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9Y1_CLOSV
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDS08696.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
MerR family transcriptional regulator
L2_013_000G1_scaffold_864_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34104..34826)
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ADQ0_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFD00069.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Transcriptional regulators
Displaying items 1-30 of 33 in total

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