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L2_013_000G1_scaffold_2007

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2007_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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261..1436
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FBP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06156.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
GGDEF domain-containing protein
L2_013_000G1_scaffold_2007_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1850..2491
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KJ67_9CLOT
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Predicted membrane protein
L2_013_000G1_scaffold_2007_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2483..3490)
DNA (1008bp) protein (336aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
aspartate/ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W2F1_9CLOT
L2_013_000G1_scaffold_2007_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3771..4829
DNA (1059bp) protein (353aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Clostridium RepID=R5U0E0_9CLOT
Sua5/YciO/YrdC/YwlC family protein
L2_013_000G1_scaffold_2007_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4921..5415
DNA (495bp) protein (165aa)
dCMP deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVY2_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EEQ62040.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_013_000G1_scaffold_2007_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5417..7159
DNA (1743bp) protein (581aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57619.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
radical SAM protein
L2_013_000G1_scaffold_2007_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7170..7835
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMJ9_9CLOT
L2_013_000G1_scaffold_2007_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7837..8565
DNA (729bp) protein (243aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57617.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_013_000G1_scaffold_2007_9
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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8558..8671
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A0F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD46786.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
L2_013_000G1_scaffold_2007_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8694..10199
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XMH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97148.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
VanW family protein
L2_013_000G1_scaffold_2007_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10196..10768
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57614.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
AIR synthase domain-containing protein
L2_013_000G1_scaffold_2007_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10784..11266
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=2 Tax=Clostridium RepID=D3AAD6_9CLOT
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CCZ62827.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
AsnC family transcriptional regulator
L2_013_000G1_scaffold_2007_13
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11263..12432
DNA (1170bp) protein (390aa)
Aminotransferase class I and II n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R301_CLOSW
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KEZ87545.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
class I and II aminotransferase
L2_013_000G1_scaffold_2007_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12448..12939
DNA (492bp) protein (164aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAZ2_9CLOT
L2_013_000G1_scaffold_2007_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13081..13779
DNA (699bp) protein (233aa)
LytTr DNA-binding region n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DQK7_DESRL
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EXG85416.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
LytTr DNA-binding protein
L2_013_000G1_scaffold_2007_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13822..14934)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57447.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
extracellular solute-binding protein
L2_013_000G1_scaffold_2007_17
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14966..15976)
DNA (1011bp) protein (337aa)
Lysozyme n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IJB0_9FIRM
Prokaryotic membrane lipoprotein lipid attachment site profile {ECO:0000313|EMBL:CDX04955.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
hypothetical protein
L2_013_000G1_scaffold_2007_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16005..16808)
DNA (804bp) protein (268aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERY0_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ60774.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Spermidine/putrescine-binding periplasmic protein
L2_013_000G1_scaffold_2007_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16808..17620)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57445.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
binding-protein-dependent transport system inner membrane protein
L2_013_000G1_scaffold_2007_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17613..18689)
DNA (1077bp) protein (359aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM25_9CLOT
spermidine/putrescine ABC transporter ATPase
L2_013_000G1_scaffold_2007_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18714..19247)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IM24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57443.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
XRE family transcriptional regulator
L2_013_000G1_scaffold_2007_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19425..20489
DNA (1065bp) protein (355aa)
6-phosphogluconolactonase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0H5_CLOSW
6-phosphogluconolactonase
6-phosphogluconolactonase {ECO:0000313|EMBL:ADL06408.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_2007_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20493..21569
DNA (1077bp) protein (359aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BSV1_CLOSY
Displaying 23 items

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