ggKbase home page

L2_013_000G1_scaffold_2063

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2063_1
unknown

Not on your lists

1..132
DNA (132bp) protein (44aa)

This feature has no annotations

L2_013_000G1_scaffold_2063_2
unknown

Not on your lists

comp(151..384)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_013_000G1_scaffold_2063_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(413..1306)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IEK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60055.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
radical SAM protein
L2_013_000G1_scaffold_2063_4
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1336..2823)
DNA (1488bp) protein (496aa)
ABC transporter related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R190_CLOSW
Glycosyl transferase family 1 {ECO:0000313|EMBL:KEZ89028.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC transporter
L2_013_000G1_scaffold_2063_5
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3216..3875)
DNA (660bp) protein (220aa)
Flavin reductase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DA98_CLOS4
Flavin reductase {ECO:0000313|EMBL:ERI99724.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
NADPH-dependent FMN reductase
L2_013_000G1_scaffold_2063_6
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3903..4691)
DNA (789bp) protein (263aa)
xynC2; acetyl esterase XynC (EC:3.1.-.-)
Acetyl esterase n=2 Tax=Bacillus cereus group RepID=C3IWP8_BACTU
Esterase family protein {ECO:0000313|EMBL:AJH03358.1}; TaxID=1452729 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis HD1002.;"
L2_013_000G1_scaffold_2063_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4675..5232)
DNA (558bp) protein (186aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R292_CLOSW
Phosphoesterase {ECO:0000313|EMBL:KEZ89121.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
phosphoesterase PA-phosphatase-like protein
L2_013_000G1_scaffold_2063_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5290..7785)
DNA (2496bp) protein (832aa)
Vitamin B12-dependent methionine synthase family protein n=2 Tax=Clostridium RepID=R5T832_9CLOT
Vitamin B12-dependent methionine synthase family protein {ECO:0000313|EMBL:CCZ61768.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
homocysteine S-methyltransferase
L2_013_000G1_scaffold_2063_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7829..8686)
DNA (858bp) protein (286aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5II50_9CLOT
L2_013_000G1_scaffold_2063_10
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8863..9426)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GLW6_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36487.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_013_000G1_scaffold_2063_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9491..9850)
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=U2C1Y6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07568.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_013_000G1_scaffold_2063_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10266..11288
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IDV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60293.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
PTS system transporter subunit IIC
L2_013_000G1_scaffold_2063_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11388..12668)
DNA (1281bp) protein (427aa)
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EEQ57294.1}; EC=4.3.1.15 {ECO:0000313|EMBL:EEQ57294.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
diaminopropionate ammonia-lyase (EC:4.3.1.15)
Diaminopropionate ammonia-lyase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGF9_9FIRM
L2_013_000G1_scaffold_2063_14
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12823..13473
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HF60_9CLOT
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AIQ62296.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L2_013_000G1_scaffold_2063_15
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(13554..14474)
DNA (921bp) protein (307aa)
LysR substrate-binding domain protein n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2U4C6_9FIRM
LysR family transcriptional regulator
Tax=GWC1_Treponema_61_84_curated
L2_013_000G1_scaffold_2063_16
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14661..15845
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PW13_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25536.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
peptidase dimerization domain-containing protein
L2_013_000G1_scaffold_2063_17
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15873..17282
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJT5_9CLOT
Malate-2H(+)/Na(+)-lactate antiporter {ECO:0000313|EMBL:KJJ73281.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
mleN
L2_013_000G1_scaffold_2063_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17279..17590
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61653.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_013_000G1_scaffold_2063_19
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17684..19354)
DNA (1671bp) protein (557aa)
von Willebrand factor type A n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KXZ6_9FIRM
von Willebrand factor type A {ECO:0000313|EMBL:CDE80676.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
von Willebrand factor type A
L2_013_000G1_scaffold_2063_20
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19396..20379)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KWB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80675.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein predicted by Glimmer/Critica
L2_013_000G1_scaffold_2063_21
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(20372..20911)
DNA (540bp) protein (180aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZUG9_9FIRM
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDD46989.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
RNA polymerase sigma factor, sigma-70 family
L2_013_000G1_scaffold_2063_22
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21044..21316)
DNA (273bp) protein (91aa)
4Fe-4S binding domain protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C908_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS72068.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
4Fe-4S ferredoxin
Displaying 22 items

View Taxonomy