ggKbase home page

L2_013_000G1_scaffold_2658

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2658_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Dinitrogenase iron-molybdenum cofactor n=2 Tax=Clostridium RepID=D3AFZ9_9CLOT
Dinitrogenase iron-molybdenum cofactor biosynthesis {ECO:0000313|EMBL:CCZ61164.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L2_013_000G1_scaffold_2658_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(312..698)
DNA (387bp) protein (129aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9Z7V8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16112.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L2_013_000G1_scaffold_2658_3
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(822..1418)
DNA (597bp) protein (199aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5X4_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ90165.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ErfK/YbiS/YcfS/YnhG family protein
L2_013_000G1_scaffold_2658_4
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1535..2419)
DNA (885bp) protein (295aa)
N-acetylneuraminate lyase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ79_9FIRM
N-acetylneuraminate lyase {ECO:0000313|EMBL:EFV17080.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
dihydrodipicolinate synthetase
L2_013_000G1_scaffold_2658_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2635..4218
DNA (1584bp) protein (528aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9K9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61748.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
peptidoglycan-binding domain-containing protein
L2_013_000G1_scaffold_2658_6
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4304..5446)
DNA (1143bp) protein (381aa)
Poly-gamma-glutamate biosynthesis protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I7M9_9CLOT
Poly-gamma-glutamate biosynthesis protein {ECO:0000313|EMBL:ETA81888.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
poly-gamma-glutamate biosynthesis protein
L2_013_000G1_scaffold_2658_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5516..6865)
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KI83_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EGN32387.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
matE7; Na+ driven multidrug efflux pump
L2_013_000G1_scaffold_2658_8
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7081..8748)
DNA (1668bp) protein (556aa)
Extracellular solute-binding protein family 5 n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0U0_NATTJ
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACB85970.1}; Flags: Precursor;; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
L2_013_000G1_scaffold_2658_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8785..9741)
DNA (957bp) protein (319aa)
ABC transporter, ATP-binding protein n=2 Tax=root RepID=A5Z5Z1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM51558.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L2_013_000G1_scaffold_2658_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9743..10717)
DNA (975bp) protein (325aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3M0_9FIRM
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EGN31964.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
peptide ABC transporter ATP-binding protein
L2_013_000G1_scaffold_2658_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10727..11596)
DNA (870bp) protein (290aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AMC7_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC97028.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transport systems inner membrane component
L2_013_000G1_scaffold_2658_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11612..12562)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MH06_ALKOO
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:AJH00169.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
binding-protein-dependent transport system inner membrane protein
L2_013_000G1_scaffold_2658_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12942..14366)
DNA (1425bp) protein (475aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9S1_9CLOT
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EHI61810.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
RNA polymerase sigma-54 factor
L2_013_000G1_scaffold_2658_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14420..15655)
DNA (1236bp) protein (412aa)
Peptidase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CE7_SOLUE
peptidase-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
L2_013_000G1_scaffold_2658_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15970..16791
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96994.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
Displaying 15 items

View Taxonomy