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L2_013_000G1_scaffold_1103

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1103_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..637)
DNA (636bp) protein (212aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R251_CLOSW
radical SAM enzyme, Cfr family
L2_013_000G1_scaffold_1103_2
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(640..1968)
DNA (1329bp) protein (443aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG14_9CLOT
sun protein
L2_013_000G1_scaffold_1103_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1961..2653)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59582.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
peptidase membrane zinc metallopeptidase
L2_013_000G1_scaffold_1103_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2655..3593)
DNA (939bp) protein (313aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9B3_9CLOT
L2_013_000G1_scaffold_1103_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3600..4085)
DNA (486bp) protein (162aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZB61_9CLOT
L2_013_000G1_scaffold_1103_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4121..6346)
DNA (2226bp) protein (742aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Primosomal protein N n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VP26_9CLOT
primosomal protein N'
L2_013_000G1_scaffold_1103_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6359..7738)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPN1_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
L2_013_000G1_scaffold_1103_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7773..9233)
DNA (1461bp) protein (487aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG07_9CLOT
UDP-N-acetylmuramyl tripeptide synthetase
L2_013_000G1_scaffold_1103_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9308..10978)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG06_9CLOT
L2_013_000G1_scaffold_1103_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11025..13694)
DNA (2670bp) protein (890aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IG05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59574.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
cell division protein FtsK
L2_013_000G1_scaffold_1103_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13861..14577)
DNA (717bp) protein (239aa)
Peptidase S14 ClpP n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TCK5_9CLOT
Peptidase S14 ClpP {ECO:0000313|EMBL:CCZ60994.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
peptidase S14 ClpP
L2_013_000G1_scaffold_1103_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14695..15744
DNA (1050bp) protein (350aa)
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:EEG52221.1}; EC=6.2.1.22 {ECO:0000313|EMBL:EEG52221.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
[citrate (pro-3S)-lyase] ligase (EC:6.2.1.22)
[citrate (Pro-3S)-lyase] ligase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8Y5_9CLOT
L2_013_000G1_scaffold_1103_13
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(15796..16254)
DNA (459bp) protein (153aa)
Hypothetical UPF0311 protein CAC3321, putative n=1 Tax=Trichomonas vaginalis RepID=A2EQL6_TRIVA
Hypothetical UPF0311 protein CAC3321, putative {ECO:0000313|EMBL:EAY05063.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein UPF0311
L2_013_000G1_scaffold_1103_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16343..17779)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2UE49_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS89158.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L2_013_000G1_scaffold_1103_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17802..18692)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GP94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY14557.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
2-hydroxy-3-oxopropionate reductase
L2_013_000G1_scaffold_1103_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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18714..19601
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WIF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06584.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
GntR family transcriptional regulator
L2_013_000G1_scaffold_1103_17
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19661..20875)
DNA (1215bp) protein (405aa)
Putative membrane associated lipase alpha/beta hydrolase family n=1 Tax=Clostridium sp. CAG:58 RepID=R6RCL7_9CLOT
Putative membrane associated lipase alpha/beta hydrolase family {ECO:0000313|EMBL:CDC45580.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
serine esterase
L2_013_000G1_scaffold_1103_18
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20946..22325)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM92_9CLOT
Gnt-II system L-idonate transporter {ECO:0000313|EMBL:KJJ72974.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
gluconate transporter
L2_013_000G1_scaffold_1103_19
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22369..23835)
DNA (1467bp) protein (489aa)
Arylsulfatase n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y0T9_9FIRM
Arylsulfatase {ECO:0000313|EMBL:ESL02573.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
N-acetylgalactosamine 6-sulfate sulfatase
L2_013_000G1_scaffold_1103_20
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23937..24638)
DNA (702bp) protein (234aa)
GntR domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8V0_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:KGK83836.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
GntR family transcriptional regulator
L2_013_000G1_scaffold_1103_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24885..26444)
DNA (1560bp) protein (520aa)
citrate lyase, alpha subunit (EC:4.1.3.6)
Citrate lyase alpha subunit n=1 Tax=Clostridium sp. CAG:81 RepID=R5GGP5_9CLOT
Citrate lyase alpha subunit {ECO:0000313|EMBL:CCY11997.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L2_013_000G1_scaffold_1103_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26446..27348)
DNA (903bp) protein (301aa)
Citrate lyase beta subunit (EC:4.1.3.6)
Citrate lyase n=4 Tax=Clostridium RepID=E7GT22_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03144.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_013_000G1_scaffold_1103_23
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27345..27644)
DNA (300bp) protein (100aa)
citrate lyase acyl carrier protein (EC:4.1.3.6)
Citrate lyase acyl carrier protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8Z1_9CLOT
Citrate lyase acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00805}; Citrate lyase gamma chain {ECO:0000256|HAMAP-Rule:MF_00805}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_013_000G1_scaffold_1103_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27995..28924
DNA (930bp) protein (310aa)
LysR substrate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8Z9_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EEG52194.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Transcriptional regulator
L2_013_000G1_scaffold_1103_25
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28958..30565)
DNA (1608bp) protein (536aa)
SH3 domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D984_9CLOT
SH3 domain protein {ECO:0000313|EMBL:EEG52102.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NLP/P60 protein
L2_013_000G1_scaffold_1103_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30871..31701
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HI34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99025.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_013_000G1_scaffold_1103_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(31738..32526)
DNA (789bp) protein (263aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RCL4_9FIRM
L2_013_000G1_scaffold_1103_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32630..33262)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ56711.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cytidylate kinase
L2_013_000G1_scaffold_1103_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33328..34125)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IED5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60145.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
L2_013_000G1_scaffold_1103_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34125..35024)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IED4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60144.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
inner-membrane translocator
Displaying 30 items

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