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L2_013_000G1_scaffold_1156

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1156_1
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..2185
DNA (2184bp) protein (728aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4UHG2_9FIRM
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EJP23647.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
sulfatase
L2_013_000G1_scaffold_1156_2
Treponema lecithinolyticum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2202..3356
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2KIX0_TRELE
Uncharacterized protein {ECO:0000313|EMBL:ERJ92015.1}; TaxID=1321815 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema lecithinolyticum ATCC 700332.;"
L2_013_000G1_scaffold_1156_3
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3559..5475)
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00036672EB
alpha-L-arabinofuranosidase
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:ADF51712.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
L2_013_000G1_scaffold_1156_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5489..6328)
DNA (840bp) protein (280aa)
ABC transporter, permease protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQI1_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO62392.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_013_000G1_scaffold_1156_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6339..7208)
DNA (870bp) protein (290aa)
ABC transporter, permease protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQI0_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO62391.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
ABC-type sugar transport systems, permease components
L2_013_000G1_scaffold_1156_6
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7248..8618)
DNA (1371bp) protein (457aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQH9_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDO62390.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L2_013_000G1_scaffold_1156_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8796..10526)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HY39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33019.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
integral membrane sensor signal transduction histidine kinase
L2_013_000G1_scaffold_1156_8
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10529..11557)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38625.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
two component transcriptional regulator, AraC family
L2_013_000G1_scaffold_1156_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11712..12668)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58072.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
conserved hypothetical protein (putative transposase or invertase)
L2_013_000G1_scaffold_1156_10
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12974..13240
DNA (267bp) protein (89aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D4CC52_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE12798.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_013_000G1_scaffold_1156_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13405..14115
DNA (711bp) protein (237aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Glycosyl transferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XPE8_9CLOT
Glycosyl transferase {ECO:0000313|EMBL:ENY97848.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L2_013_000G1_scaffold_1156_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14281..15630)
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9N6_9CLOT
L2_013_000G1_scaffold_1156_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15707..16537)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61774.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_000G1_scaffold_1156_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16684..17385)
DNA (702bp) protein (234aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
MTA/SAH nucleosidase n=10 Tax=Clostridium RepID=G5HXY5_9CLOT
L2_013_000G1_scaffold_1156_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17662..17910
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59079.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_013_000G1_scaffold_1156_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17967..18476)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TN83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ58397.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L2_013_000G1_scaffold_1156_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18522..19325)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9N2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61771.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_013_000G1_scaffold_1156_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19436..20506
DNA (1071bp) protein (357aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape ptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9N1_9CLOT
L2_013_000G1_scaffold_1156_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20533..21033)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9N0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61769.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_013_000G1_scaffold_1156_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21060..21479)
DNA (420bp) protein (140aa)
Cell cycle regulation histidine triad (HIT) protein n=4 Tax=Clostridium RepID=N9YXK4_9CLOT
Cell cycle regulation histidine triad (HIT) protein {ECO:0000313|EMBL:ENZ16748.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L2_013_000G1_scaffold_1156_21
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21500..22114)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VHQ1_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EXG84404.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
rhomboid family protein
L2_013_000G1_scaffold_1156_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22234..23514)
DNA (1281bp) protein (427aa)
FHA domain containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0Y4_CLOSW
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ADL02783.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_1156_23
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23524..23844)
DNA (321bp) protein (107aa)
Conserved domain protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5SX99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EXG84396.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L2_013_000G1_scaffold_1156_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23841..24260)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WQZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89957.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Type IV leader peptidase family.
L2_013_000G1_scaffold_1156_25
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24263..25210)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0Y1_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ87928.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L2_013_000G1_scaffold_1156_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25227..27152)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A5Q4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47505.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_013_000G1_scaffold_1156_27
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27394..27783)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WT63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72441.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_013_000G1_scaffold_1156_28
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27780..29288)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SLG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC56241.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
Phage integrase family.
L2_013_000G1_scaffold_1156_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29266..31236)
DNA (1971bp) protein (657aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WP29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77028.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinase XerD
L2_013_000G1_scaffold_1156_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31253..32371)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YW85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12047.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Site-specific recombinase XerD
Displaying items 1-30 of 31 in total

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