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L2_013_000G1_scaffold_1339

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1339_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(320..1180)
DNA (861bp) protein (287aa)
AraC family transcriptional regulator n=3 Tax=Clostridium RepID=N9Z2B1_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ14152.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator, AraC family
L2_013_000G1_scaffold_1339_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1375..2664
DNA (1290bp) protein (430aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EK79_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEQ56870.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC-type sugar transport system, periplasmic component
L2_013_000G1_scaffold_1339_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2733..3614
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61700.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
permease component of ABC-type sugar transporter
L2_013_000G1_scaffold_1339_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3632..4465
DNA (834bp) protein (278aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RTD0_9CLOT
Multiple sugar ABC transporter permease {ECO:0000313|EMBL:ENZ50593.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
ABC transporter permease
L2_013_000G1_scaffold_1339_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4546..6738
DNA (2193bp) protein (731aa)
Alpha-galactosidase (EC:3.2.1.22)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9G3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61702.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_013_000G1_scaffold_1339_6
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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6962..7858
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HCG5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25208.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
protein of unknown function DUF6 transmembrane
L2_013_000G1_scaffold_1339_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8035..9486
DNA (1452bp) protein (484aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IE67_9CLOT
L2_013_000G1_scaffold_1339_8
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9479..11362
DNA (1884bp) protein (628aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
UvrD/REP helicase n=2 Tax=Clostridium RepID=D3ALJ7_9CLOT
UvrD/REP helicase
L2_013_000G1_scaffold_1339_9
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11366..11890
DNA (525bp) protein (175aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W6C2_9CLOT
ATP:corrinoid adenosyltransferase {ECO:0000313|EMBL:EXG85734.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
L2_013_000G1_scaffold_1339_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11985..12308
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8U0_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03915.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_1339_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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12534..13712
DNA (1179bp) protein (393aa)
ROK family protein n=2 Tax=Clostridium RepID=D3ADK7_9CLOT
ROK family protein {ECO:0000313|EMBL:EFD00117.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ROK family transcriptional regulator
L2_013_000G1_scaffold_1339_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13993..15621
DNA (1629bp) protein (543aa)
PTS system N-acetylgalactosamine-specific IID component n=9 Tax=Clostridium RepID=N9UZS0_9CLOT
PTS system N-acetylgalactosamine-specific IID component {ECO:0000313|EMBL:ENZ17802.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PTS system mannose/fructose/sorbose family transporter subunit IIC
L2_013_000G1_scaffold_1339_13
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15735..16838
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IRL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53282.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Protein of unknown function (DUF3706)./Phosphoribosyl transferase domain.
L2_013_000G1_scaffold_1339_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16840..17889
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KP48_9FIRM
Protein of unknown function (DUF2983).
Uncharacterized protein {ECO:0000313|EMBL:CBL08650.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_013_000G1_scaffold_1339_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17903..18907
DNA (1005bp) protein (335aa)
ATP-grasp domain protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YI08_9FIRM
ATP-grasp domain protein {ECO:0000313|EMBL:CDA24389.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L2_013_000G1_scaffold_1339_16
unknown

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19076..19246
DNA (171bp) protein (57aa)

This feature has no annotations

L2_013_000G1_scaffold_1339_17
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19495..20457)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24512.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Citrate lyase beta subunit
L2_013_000G1_scaffold_1339_18
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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20605..22050
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24487.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
putative serine protease
L2_013_000G1_scaffold_1339_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22068..22676
DNA (609bp) protein (203aa)
Peptidase, S54 family {ECO:0000313|EMBL:EEV01932.1}; EC=3.4.21.- {ECO:0000313|EMBL:EEV01932.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Peptidase, S54 family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G889_9FIRM
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L2_013_000G1_scaffold_1339_20
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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22692..24968
DNA (2277bp) protein (759aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium A2 RepID=R9KMN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47598.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L2_013_000G1_scaffold_1339_21
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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24971..26110
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IRE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24475.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Uncharacterized protein involved in tellurite resistance
L2_013_000G1_scaffold_1339_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26131..26712
DNA (582bp) protein (194aa)
Bacterial stress protein n=4 Tax=Roseburia RepID=C7G892_9FIRM
Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Bacterial stress protein {ECO:0000313|EMBL:EEV01935.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_013_000G1_scaffold_1339_23
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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26722..27303
DNA (582bp) protein (194aa)
Tellurium resistance protein TerD n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IRL4_9FIRM
Tellurium resistance protein TerD {ECO:0000313|EMBL:EOS24473.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
stress protein
L2_013_000G1_scaffold_1339_24
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27312..27917
DNA (606bp) protein (202aa)
Stress protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBW3_9FIRM
Stress protein {ECO:0000313|EMBL:CDA24380.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
tellurium resistance protein
L2_013_000G1_scaffold_1339_25
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27931..28521
DNA (591bp) protein (197aa)
Uncharacterized proteins involved in stress response homologs of TerZ and putative cAMP-binding protein CABP1 n=1 Tax=Roseburia sp. CAG:303 RepID=R7IP71_9FIRM
Uncharacterized proteins involved in stress response homologs of TerZ and putative cAMP-binding protein CABP1 {ECO:0000313|EMBL:CDE53108.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
L2_013_000G1_scaffold_1339_26
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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28765..29868
DNA (1104bp) protein (368aa)
Calcium-translocating P-type ATPase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BGM9_9FIRM
Calcium-translocating P-type ATPase {ECO:0000313|EMBL:CDA62345.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
plasma-membrane calcium-translocating P-type ATPase
Displaying 26 items

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