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L2_013_000G1_scaffold_1488

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1488_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..156
DNA (156bp) protein (52aa)
ATP-dependent RNA helicase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UX07_CLOBO
hypothetical protein
Helicase {ECO:0000313|EMBL:KJU72666.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_013_000G1_scaffold_1488_2
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(97..621)
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Blautia sp. CAG:237 RepID=R6L6P0_9FIRM
transcriptional regulator
Tax=GWC1_Treponema_61_84_curated
L2_013_000G1_scaffold_1488_3
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

848..1195
DNA (348bp) protein (116aa)
Cupin domain-containing protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D243_DESAJ
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AFM39867.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4).;"
L2_013_000G1_scaffold_1488_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1207..1938
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56702.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transferase protein
L2_013_000G1_scaffold_1488_5
Bacillus marmarensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2004..3050
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Bacillus marmarensis DSM 21297 RepID=U6SSH7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERN53601.1}; TaxID=1188261 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus marmarensis DSM 21297.;"
hypothetical protein
L2_013_000G1_scaffold_1488_6
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3074..3553
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RK70_ACIFV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB47472.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L2_013_000G1_scaffold_1488_7
Oceanobacillus iheyensis, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3636..5144
DNA (1509bp) protein (503aa)
Tat pathway signal protein n=1 Tax=Oceanobacillus kimchii RepID=UPI00034C02CB
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:BAC14794.1}; TaxID=221109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /; HTE831).;"
L2_013_000G1_scaffold_1488_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5163..6464
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R7A9_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05541.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_1488_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6499..8028
DNA (1530bp) protein (510aa)
SAF domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQI5_9FIRM
SAF domain protein {ECO:0000313|EMBL:EHM51072.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Altronate dehydratase
L2_013_000G1_scaffold_1488_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8082..8981)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56989.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
transcriptional regulator
L2_013_000G1_scaffold_1488_11
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9186..10529
DNA (1344bp) protein (448aa)
Glucarate dehydratase (EC:4.2.1.40)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JKF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61810.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_013_000G1_scaffold_1488_12
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10654..11142
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JVK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61811.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_013_000G1_scaffold_1488_13
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11153..12664
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KI15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61812.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Tat pathway signal protein
L2_013_000G1_scaffold_1488_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12664..13812
DNA (1149bp) protein (383aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9ZYC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ70072.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_013_000G1_scaffold_1488_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14069..15211
DNA (1143bp) protein (381aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQJ1_9FIRM
L2_013_000G1_scaffold_1488_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15427..16272
DNA (846bp) protein (282aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RRF4_9CLOT
RpiR family transcriptional regulator {ECO:0000313|EMBL:ENZ53064.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
RpiR family transcriptional regulator
L2_013_000G1_scaffold_1488_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16321..17217
DNA (897bp) protein (299aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
N-acetylmuramic acid 6-phosphate etherase n=8 Tax=Clostridium RepID=G5I0U7_9CLOT
RpiR family transcriptional regulator
L2_013_000G1_scaffold_1488_18
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17274..18434
DNA (1161bp) protein (387aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R0D0_CLOB3
extracellular solute-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ADC91020.1}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" source="Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp.; BVAB3 (strain UPII9-5)).;"
L2_013_000G1_scaffold_1488_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18447..19541
DNA (1095bp) protein (365aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Polyamine-transporting ATPase (EC:3.6.3.31)
Ferric cations import ATP-binding protein FbpC n=3 Tax=Clostridium butyricum RepID=B1R264_CLOBU
L2_013_000G1_scaffold_1488_20
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19534..21186
DNA (1653bp) protein (551aa)
iron ABC transporter permease n=1 Tax=Paenibacillus terrigena RepID=UPI00035EDE3E
Iron ABC transporter permease {ECO:0000313|EMBL:CEG25772.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
binding-protein-dependent transport systems inner membrane component
L2_013_000G1_scaffold_1488_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21181..22626)
DNA (1446bp) protein (482aa)
MATE efflux family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CYG5_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG55899.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative efflux protein, MATE family
L2_013_000G1_scaffold_1488_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22852..23760)
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EED4_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEQ56987.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Transcriptional regulator
L2_013_000G1_scaffold_1488_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23944..25251
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Clostridium clostridioforme RepID=N9Z7H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15997.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_013_000G1_scaffold_1488_24
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25280..26797
DNA (1518bp) protein (506aa)
garD; galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydratase n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JKF7_9CLOT
Galactarate dehydratase {ECO:0000313|EMBL:CDB61815.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_013_000G1_scaffold_1488_25
unknown

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27092..27274
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 25 items

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