ggKbase home page

L2_013_000G1_scaffold_1557

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1557_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..736)
DNA (735bp) protein (245aa)
Polysaccharide deacetylase n=2 Tax=Clostridium symbiosum RepID=E9SQW8_CLOSY
Polysaccharide deacetylase {ECO:0000313|EMBL:ERI76858.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
polysaccharide deacetylase
L2_013_000G1_scaffold_1557_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

856..2088
DNA (1233bp) protein (411aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60571.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_013_000G1_scaffold_1557_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2258..4543
DNA (2286bp) protein (762aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00153.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_013_000G1_scaffold_1557_4
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4746..6995)
DNA (2250bp) protein (750aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZX1_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG86498.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L2_013_000G1_scaffold_1557_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6940..9201)
DNA (2262bp) protein (754aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZX0_CLOSW
Multidrug transporter {ECO:0000313|EMBL:KEZ89653.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L2_013_000G1_scaffold_1557_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9499..10092
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZW9_CLOSW
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADL04420.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_013_000G1_scaffold_1557_7
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10525..13239
DNA (2715bp) protein (905aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GGX2_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO38927.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_013_000G1_scaffold_1557_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13406..13714)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG55554.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
sulfonate/nitrate/taurine transport system substrate-binding protein
L2_013_000G1_scaffold_1557_9
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13899..15260)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83567.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
phage site-specific recombinase
L2_013_000G1_scaffold_1557_10
unknown

Not on your lists

15468..15599
DNA (132bp) protein (44aa)

This feature has no annotations

L2_013_000G1_scaffold_1557_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15766..16278
DNA (513bp) protein (171aa)
Sporulation initiation factor Spo0A C terminal n=3 Tax=Clostridium RepID=D6DIL1_CLOSC
Sporulation initiation factor Spo0A C terminal.
Sporulation initiation factor Spo0A C terminal {ECO:0000313|EMBL:CBK77535.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_013_000G1_scaffold_1557_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16342..16917)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60584.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_013_000G1_scaffold_1557_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16989..18269)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EZZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98340.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
acyltransferase 3
L2_013_000G1_scaffold_1557_14
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18449..19255
DNA (807bp) protein (269aa)
Cof-like hydrolase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZE3_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEG55556.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
cof family hydrolase
L2_013_000G1_scaffold_1557_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19392..19685
DNA (294bp) protein (98aa)
TrpR family protein YerC/YecD n=2 Tax=Clostridium RepID=D3ADC6_9CLOT
TrpR protein {ECO:0000313|EMBL:CCZ61845.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
TrpR-like protein YerC/YecD
L2_013_000G1_scaffold_1557_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19743..20366)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60587.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_000G1_scaffold_1557_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20574..20957
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID23_9CLOT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHI60588.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
endoribonuclease L-PSP
L2_013_000G1_scaffold_1557_18
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21189..23465
DNA (2277bp) protein (759aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
UvrD/REP helicase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZ72_CLOSW
UvrD/REP helicase
L2_013_000G1_scaffold_1557_19
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23607..23894
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B076_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56212.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_013_000G1_scaffold_1557_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24213..25592
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60592.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
TrmA family RNA methyltransferase
L2_013_000G1_scaffold_1557_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26178..26408
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG55498.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
cytoplasmic protein
Displaying 21 items

View Taxonomy