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L2_013_000G1_scaffold_1570

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1570_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..488
DNA (486bp) protein (162aa)
Predicted O-methyltransferase n=2 Tax=Clostridium RepID=D6DKT4_CLOSC
Predicted O-methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBK78308.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_013_000G1_scaffold_1570_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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498..1727
DNA (1230bp) protein (410aa)
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=2 Tax=Clostridium symbiosum RepID=E9SNE0_CLOSY
Peptidase, U32 family {ECO:0000313|EMBL:ERI77328.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L2_013_000G1_scaffold_1570_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1838..2665
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58099.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_013_000G1_scaffold_1570_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2707..5628
DNA (2922bp) protein (974aa)
Peptidase M16 family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T690_9CLOT
Peptidase M16 family {ECO:0000313|EMBL:CCZ58704.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Peptidase M16C associated domain-containing protein
L2_013_000G1_scaffold_1570_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5659..6564
DNA (906bp) protein (302aa)
GTPase Era n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHT0_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
GTP-binding protein Era
L2_013_000G1_scaffold_1570_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6660..7316
DNA (657bp) protein (219aa)
DNA repair protein RecO n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK32_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
DNA repair protein RecO
L2_013_000G1_scaffold_1570_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7390..8049
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AH25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98881.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L2_013_000G1_scaffold_1570_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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8071..9459
DNA (1389bp) protein (463aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IK30_9CLOT
L2_013_000G1_scaffold_1570_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9546..10880
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VXF7_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENY95425.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
multi antimicrobial extrusion protein MatE
L2_013_000G1_scaffold_1570_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11089..13710
DNA (2622bp) protein (874aa)
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5SZQ7_9CLOT
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCZ58758.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L2_013_000G1_scaffold_1570_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14070..15311
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SIA1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73779.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L2_013_000G1_scaffold_1570_12
unknown

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15849..16616
DNA (768bp) protein (256aa)

This feature has no annotations

L2_013_000G1_scaffold_1570_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16699..16905)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ID88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60535.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Predicted transcriptional regulator
L2_013_000G1_scaffold_1570_14
unknown

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16996..17334
DNA (339bp) protein (113aa)

This feature has no annotations

L2_013_000G1_scaffold_1570_15
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17335..17808)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2XZ70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55345.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
NADH:ubiquinone oxidoreductase 24 kD subunit
L2_013_000G1_scaffold_1570_16
unknown

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17883..17987
DNA (105bp) protein (35aa)

This feature has no annotations

L2_013_000G1_scaffold_1570_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18082..18936
DNA (855bp) protein (285aa)
Putative transcriptional regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TJ70_9CLOT
Putative transcriptional regulator {ECO:0000313|EMBL:CCZ63374.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
MerR family transcriptional regulator
L2_013_000G1_scaffold_1570_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19065..20105
DNA (1041bp) protein (347aa)
Dihydrodipicolinate reductase domain protein {ECO:0000313|EMBL:EFC99957.1}; EC=1.17.1.8 {ECO:0000313|EMBL:EFC99957.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Dihydrodipicolinate reductase domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AE01_9CLOT
dihydrodipicolinate reductase
L2_013_000G1_scaffold_1570_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20356..21156
DNA (801bp) protein (267aa)
UPF0246 protein CLOSTASPAR_04202 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4K8_9CLOT
UPF0246 protein CLOSTASPAR_04202 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_013_000G1_scaffold_1570_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21167..21631
DNA (465bp) protein (155aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EEG53752.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEG53752.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Antioxidant, AhpC/TSA family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4K9_9CLOT
peroxiredoxin
L2_013_000G1_scaffold_1570_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21893..22759
DNA (867bp) protein (289aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7R1_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEG52620.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_013_000G1_scaffold_1570_22
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22785..24047
DNA (1263bp) protein (421aa)
Citrate transporter (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7R0_9CLOT
Citrate transporter {ECO:0000313|EMBL:EEG52619.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
citrate transporter family protein
L2_013_000G1_scaffold_1570_23
unknown

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23993..24082
DNA (90bp) protein (30aa)

This feature has no annotations

L2_013_000G1_scaffold_1570_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24107..25039
DNA (933bp) protein (311aa)
LysR substrate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D7R2_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EEG52621.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transcriptional regulator
L2_013_000G1_scaffold_1570_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25145..25783
DNA (639bp) protein (213aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T782_9CLOT
L2_013_000G1_scaffold_1570_26
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26042..26275
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHG4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA68982.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
Displaying 26 items

View Taxonomy