ggKbase home page

L2_013_000G1_scaffold_1631

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1631_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1579)
DNA (1578bp) protein (526aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EET8_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG30057.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ABC-type multidrug transport system, ATPase and permease components
L2_013_000G1_scaffold_1631_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1576..3351)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9V2M9_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY84669.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ABC-type multidrug transport system, ATPase and permease components
L2_013_000G1_scaffold_1631_3
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3462..4079)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MJE6_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDR95728.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
transcriptional regulator, TetR family
L2_013_000G1_scaffold_1631_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4409..4648
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61877.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
serine/threonine protein kinase
L2_013_000G1_scaffold_1631_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4743..6146
DNA (1404bp) protein (468aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SA57_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDP21933.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
putative efflux protein, MATE family
L2_013_000G1_scaffold_1631_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6143..6721
DNA (579bp) protein (193aa)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPK8_9CLOT
Cytidylate kinase {ECO:0000313|EMBL:CDA77620.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Cytidylate kinase
L2_013_000G1_scaffold_1631_7
unknown

Not on your lists

6839..7345
DNA (507bp) protein (169aa)

This feature has no annotations

L2_013_000G1_scaffold_1631_8
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7480..8154
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UH48_RUMA7
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU22040.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_013_000G1_scaffold_1631_9
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8138..9661
DNA (1524bp) protein (508aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
histidine kinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36FDF
integral membrane sensor signal transduction histidine kinase
L2_013_000G1_scaffold_1631_10
unknown

Not on your lists

9661..9771
DNA (111bp) protein (37aa)

This feature has no annotations

L2_013_000G1_scaffold_1631_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10097..13048
DNA (2952bp) protein (984aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ31_9CLOT
Phytochrome-like protein cph2 {ECO:0000313|EMBL:KJJ69685.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L2_013_000G1_scaffold_1631_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13132..13926)
DNA (795bp) protein (265aa)
D-aminopeptidase n=5 Tax=Clostridium RepID=N9Z6W9_9CLOT
D-aminopeptidase {ECO:0000313|EMBL:ENZ46420.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
D-aminopeptidase
L2_013_000G1_scaffold_1631_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14076..14771
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58071.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
transcriptional regulator
L2_013_000G1_scaffold_1631_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15041..16849
DNA (1809bp) protein (603aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58070.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_013_000G1_scaffold_1631_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16918..18273)
DNA (1356bp) protein (452aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR59_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFC95698.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L2_013_000G1_scaffold_1631_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18312..19169)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0BF99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ52463.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_013_000G1_scaffold_1631_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19159..20055)
DNA (897bp) protein (299aa)
Putative transmembrane permease MsmF n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUS6_9FIRM
Putative transmembrane permease MsmF {ECO:0000313|EMBL:EEQ61770.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_013_000G1_scaffold_1631_18
unknown

Not on your lists

20213..20461
DNA (249bp) protein (83aa)

This feature has no annotations

L2_013_000G1_scaffold_1631_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20474..22012
DNA (1539bp) protein (513aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKB3_9CLOT
L2_013_000G1_scaffold_1631_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22384..23001
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5W5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53279.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_013_000G1_scaffold_1631_21
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23228..24766
DNA (1539bp) protein (513aa)
Putative membrane protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T6K1_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CCZ61193.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L2_013_000G1_scaffold_1631_22
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24781..25461
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J562_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29299.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L2_013_000G1_scaffold_1631_23
unknown

Not on your lists

comp(25477..25563)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 23 items

View Taxonomy