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L2_013_000G1_scaffold_1784

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1784_1
unknown

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comp(1..948)
DNA (948bp) protein (316aa)

This feature has no annotations

L2_013_000G1_scaffold_1784_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1194..2888
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KC78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39530.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
extracellular solute-binding protein, family 1
L2_013_000G1_scaffold_1784_3
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2973..3908
DNA (936bp) protein (312aa)
sugar ABC transporter permease n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289DC34
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGC69655.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L2_013_000G1_scaffold_1784_4
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3918..4799
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EHZ8_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:KEZ90838.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
lplC10; protein LplC
L2_013_000G1_scaffold_1784_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5300..5731
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47267.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
KilA domain-containing protein
L2_013_000G1_scaffold_1784_6
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5930..7417
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA80067.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
Di-and tricarboxylate transporters
L2_013_000G1_scaffold_1784_7
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7561..8037)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB37_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CQR58203.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L2_013_000G1_scaffold_1784_8
Paenibacillus graminis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8123..8938)
DNA (816bp) protein (272aa)
Transcriptional regulator, effector binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ARM5_9CLOT
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AIQ71008.1}; TaxID=189425 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus graminis.;"
L2_013_000G1_scaffold_1784_9
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(9067..10023)
DNA (957bp) protein (319aa)
nitrite and sulfite reductase subunit n=1 Tax=Blautia producta RepID=UPI00037A5AE1
Dissimilatory sulfite reductase (Desulfoviridin) alpha and beta subunits {ECO:0000313|EMBL:CDC93483.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L2_013_000G1_scaffold_1784_10
Facklamia languida, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(10076..10987)
DNA (912bp) protein (304aa)
UPI0003D6053B related cluster n=1 Tax=unknown RepID=UPI0003D6053B
bacterial regulatory helix-turn-helix , lysR family protein
Uncharacterized protein {ECO:0000313|EMBL:EHR38190.1}; TaxID=883113 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia languida CCUG 37842.;"
L2_013_000G1_scaffold_1784_11
GWA2_RIF01_43_8_curated, RIF1, Bacteria

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comp(11123..12076)
DNA (954bp) protein (318aa)
4Fe-4S binding domain protein id=4194138 bin=GWF2_Lentisphaerae_49_21 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Iron-sulfur cluster-binding protein
Tax=GWA2_RIF01_43_8_curated
L2_013_000G1_scaffold_1784_12
unknown

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comp(12314..12778)
DNA (465bp) protein (155aa)

This feature has no annotations

L2_013_000G1_scaffold_1784_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12793..13743)
DNA (951bp) protein (317aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
L2_013_000G1_scaffold_1784_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13848..14825)
DNA (978bp) protein (326aa)
4Fe-4S binding domain protein id=4243650 bin=GWF2_Lentisphaerae_49_21 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Iron-sulfur cluster-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
L2_013_000G1_scaffold_1784_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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14963..15976
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FL14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83269.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPase AAA
L2_013_000G1_scaffold_1784_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16000..16473
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMF3_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI88941.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_013_000G1_scaffold_1784_17
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16655..17707
DNA (1053bp) protein (351aa)
Ethanolamine utilization protein EutH n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JLC5_CELLD
ethanolamine utilization protein EutH
Ethanolamine utilization protein EutH {ECO:0000313|EMBL:ADZ82213.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_013_000G1_scaffold_1784_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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17700..19058
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61741.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
MATE efflux family protein
L2_013_000G1_scaffold_1784_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19051..21399)
DNA (2349bp) protein (783aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61749.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
integral membrane sensor signal transduction histidine kinase
L2_013_000G1_scaffold_1784_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21408..22163)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I9L1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61750.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
winged helix family two component transcriptional regulator
L2_013_000G1_scaffold_1784_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22440..23744)
DNA (1305bp) protein (435aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AF60_9CLOT
Displaying 21 items

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