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L2_013_000G1_scaffold_1819

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1819_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(3..182)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4M7_9FIRM
sulfatase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
L2_013_000G1_scaffold_1819_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(218..958)
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LII5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EET59567.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ssuB; ABC transporter ATP-binding protein
L2_013_000G1_scaffold_1819_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(981..1754)
DNA (774bp) protein (258aa)
ABC transporter, ATP-binding protein n=2 Tax=Roseburia RepID=C0FV85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30210.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC transporter
L2_013_000G1_scaffold_1819_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1733..2518)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XLX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96993.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_013_000G1_scaffold_1819_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2518..3309)
DNA (792bp) protein (264aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHR9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ57754.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
L2_013_000G1_scaffold_1819_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3335..4483)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58404.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ssuA; ABC transporter substrate-binding protein
L2_013_000G1_scaffold_1819_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4850..6625
DNA (1776bp) protein (592aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XR92_9CLOT
signal transduction protein
L2_013_000G1_scaffold_1819_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6603..8099
DNA (1497bp) protein (499aa)
Response regulator receiver domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHR3_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEQ57748.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
two component transcriptional regulator, AraC family
L2_013_000G1_scaffold_1819_9
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8156..9331)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C02F3
Butanol dehydrogenase {ECO:0000313|EMBL:KGK82233.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
iron-containing alcohol dehydrogenase
L2_013_000G1_scaffold_1819_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9333..10013)
DNA (681bp) protein (227aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Ribokinase n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZPS2_9CLOT
Ribokinase {ECO:0000313|EMBL:ENZ41811.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_013_000G1_scaffold_1819_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10040..10795)
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein n=2 Tax=Clostridium bolteae RepID=R0BNS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13351.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC transporter
L2_013_000G1_scaffold_1819_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10818..11579)
DNA (762bp) protein (254aa)
NitT/TauT family ABC transporter ATP-binding protein n=6 Tax=Clostridium clostridioforme RepID=N9V8S9_9CLOT
NitT/TauT family ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ61359.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ABC transporter
L2_013_000G1_scaffold_1819_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11561..12331)
DNA (771bp) protein (257aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=U2DBH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57406.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tauC; nitrate/sulfonate/taurine/bicarbonate ABC transporter permease
L2_013_000G1_scaffold_1819_14
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12324..13133)
DNA (810bp) protein (270aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=U2BXA9_9CLOT
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:KHK01718.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
nitrate/sulfonate/bicarbonate ABC transporter permease
L2_013_000G1_scaffold_1819_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13167..14351)
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C894_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35205.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
L2_013_000G1_scaffold_1819_16
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14599..15621
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LXB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62976.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
LacI family transcriptional regulator
L2_013_000G1_scaffold_1819_17
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15693..16865)
DNA (1173bp) protein (391aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QWU2_SPHPG
L-alanine-DL-glutamate epimerase-like protein
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:AEV28386.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
L2_013_000G1_scaffold_1819_18
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(16880..17827)
DNA (948bp) protein (316aa)
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase (EC:1.3.1.20)
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase {ECO:0000313|EMBL:AJQ28433.1}; EC=1.3.1.20 {ECO:0000313|EMBL:AJQ28433.1};; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
Oxidoreductase domain protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I9DK49_9FIRM
L2_013_000G1_scaffold_1819_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17987..18829
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57373.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
AraC family transcriptional regulator
L2_013_000G1_scaffold_1819_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18858..20222)
DNA (1365bp) protein (455aa)
MmgE/PrpD family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPX7_9CLOT
MmgE/PrpD family protein {ECO:0000313|EMBL:CCY42324.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
MmgE/PrpD family protein
L2_013_000G1_scaffold_1819_21
Paenibacillus sp. Aloe-11, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20379..20747)
DNA (369bp) protein (123aa)
Translation initiation inhibitor n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CNJ8_9BACL
Translation initiation inhibitor {ECO:0000313|EMBL:EHS56037.1}; TaxID=1050222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. Aloe-11.;"
endoribonuclease L-PSP
L2_013_000G1_scaffold_1819_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20786..21949)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Clostridium clostridioforme RepID=N9Y782_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68030.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
class V aminotransferase
L2_013_000G1_scaffold_1819_23
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21996..23228)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RAP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC45988.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Na+/H+-dicarboxylate symporters
L2_013_000G1_scaffold_1819_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23337..23465)
DNA (129bp) protein (43aa)
3-methylitaconate isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZZ5_9CLOT
3-methylitaconate isomerase {ECO:0000313|EMBL:CCY42331.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying 24 items

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