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L2_013_000G1_scaffold_4419

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_4419_1
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..506)
DNA (504bp) protein (168aa)
ABC transporter periplasmic subunit n=2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4YJW1_CLOSH
ABC transporter periplasmic subunit
Lipoprotein LipO {ECO:0000313|EMBL:AGC67229.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L2_013_000G1_scaffold_4419_2

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comp(525..1406)
DNA (882bp) protein (294aa)
Binding-protein-dependent transport system inner membrane component (Fragment) n=2 Tax=human gut metagenome RepID=K1TUX3_9ZZZZ
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EKC73583.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sugar ABC transporter permease
L2_013_000G1_scaffold_4419_3

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comp(1403..2335)
DNA (933bp) protein (311aa)
Binding-protein-dependent transport system inner membrane component n=2 Tax=human gut metagenome RepID=K1U136_9ZZZZ
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EKC73584.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type transporter, integral membrane subunit
L2_013_000G1_scaffold_4419_4
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2503..4761)
DNA (2259bp) protein (753aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00037D03C8
Uncharacterized protein {ECO:0000313|EMBL:EOS54636.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
AraC family transcriptional regulator
L2_013_000G1_scaffold_4419_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5033..6700
DNA (1668bp) protein (556aa)
MutS domain V protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D1E6_9CLOT
MutS domain V protein {ECO:0000313|EMBL:EEG54851.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
DNA mismatch repair protein MutS domain-containing protein
L2_013_000G1_scaffold_4419_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6837..7847)
DNA (1011bp) protein (337aa)
MtaA/CmuA family methyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RX95_9FIRM
MtaA/CmuA family methyltransferase {ECO:0000313|EMBL:EHL66272.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
uroporphyrinogen-III decarboxylase
L2_013_000G1_scaffold_4419_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7985..8233)
DNA (249bp) protein (83aa)
Putative iron-only hydrogenase system regulator n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3S6_9CLOT
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:EEG54007.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
iron-only hydrogenase system regulator
L2_013_000G1_scaffold_4419_8
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8500..8772
DNA (273bp) protein (91aa)
UPI0003D625B1 related cluster n=1 Tax=unknown RepID=UPI0003D625B1
Uncharacterized protein {ECO:0000313|EMBL:ETI69940.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
hypothetical protein
L2_013_000G1_scaffold_4419_9
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8784..9791
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKV0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFC62276.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
L2_013_000G1_scaffold_4419_10
unknown

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9810..10214
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 10 items

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