ggKbase home page

L2_013_000G1_scaffold_2751

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_2751_1
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(91..315)
DNA (225bp) protein (75aa)
Integrase catalytic region n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GT04_9FIRM
Integrase catalytic region {ECO:0000313|EMBL:CDE29077.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
transposase
L2_013_000G1_scaffold_2751_2
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(345..1088)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GPV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29076.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
Transposase
L2_013_000G1_scaffold_2751_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1159..1809)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74656.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_2751_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1781..2656)
DNA (876bp) protein (292aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS74657.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC-type multidrug transport system, ATPase component
L2_013_000G1_scaffold_2751_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2659..3030)
DNA (372bp) protein (124aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDS74658.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Predicted transcriptional regulators
L2_013_000G1_scaffold_2751_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3135..4490)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDS74659.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
putative efflux protein, MATE family
L2_013_000G1_scaffold_2751_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4763..7945)
DNA (3183bp) protein (1061aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H5_9FIRM
L2_013_000G1_scaffold_2751_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7938..9026)
DNA (1089bp) protein (363aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H6_9FIRM
carbamoyl-phosphate synthase small subunit
L2_013_000G1_scaffold_2751_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9037..10455)
DNA (1419bp) protein (473aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H7_9FIRM
L2_013_000G1_scaffold_2751_10
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10455..12065)
DNA (1611bp) protein (537aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H8_9FIRM
L2_013_000G1_scaffold_2751_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12199..12765)
DNA (567bp) protein (189aa)
ANTAR domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2H9_9FIRM
ANTAR domain protein {ECO:0000313|EMBL:EDS74664.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
response regulator receiver/ANTAR domain-containing protein
L2_013_000G1_scaffold_2751_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12785..14026)
DNA (1242bp) protein (414aa)
Glutamine synthetase, beta-grasp domain protein {ECO:0000313|EMBL:EDS74665.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDS74665.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Glutamine synthetase, beta-grasp domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2I0_9FIRM
glutamine synthetase, type I
L2_013_000G1_scaffold_2751_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14177..14659)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BB88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82640.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
sodium/hydrogen exchanger
L2_013_000G1_scaffold_2751_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14728..15399)
DNA (672bp) protein (224aa)
Sodium/hydrogen exchanger n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G927_9FIRM
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EFW05468.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
sodium/hydrogen exchanger
L2_013_000G1_scaffold_2751_15
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15396..15926)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G926_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05467.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
TetR family transcriptional regulator
Displaying 15 items

View Taxonomy