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L2_013_000G1_scaffold_1060

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1060_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..130
DNA (129bp) protein (43aa)
Lactaldehyde reductase {ECO:0000313|EMBL:EDS74807.1}; EC=1.1.1.77 {ECO:0000313|EMBL:EDS74807.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Lactaldehyde reductase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C2D1_9FIRM
hypothetical protein
L2_013_000G1_scaffold_1060_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

327..875
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AQB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45248.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_013_000G1_scaffold_1060_3
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

875..2368
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AQB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45247.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_013_000G1_scaffold_1060_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2399..2773
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AQB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45246.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_013_000G1_scaffold_1060_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3193..3585
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C013_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75503.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1060_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3594..4076)
DNA (483bp) protein (161aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Phosphodiesterase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C014_9FIRM
phosphoesterase
L2_013_000G1_scaffold_1060_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4217..4921
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C015_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS75505.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_013_000G1_scaffold_1060_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4924..8160
DNA (3237bp) protein (1079aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C016_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDS75506.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1060_9
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8375..9820
DNA (1446bp) protein (482aa)
NlpC/P60 family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C017_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EDS75507.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
NLP/P60 family protein
L2_013_000G1_scaffold_1060_10
Lactococcus lactis, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10230..10634)
DNA (405bp) protein (135aa)
Transcriptional regulator, MerR family n=1 Tax=Lactococcus lactis subsp. lactis Dephy 1 RepID=U6ELY5_LACLL
putative transcriptional regulator
Predicted transcriptional regulators {ECO:0000313|EMBL:GAM80420.1}; TaxID=1360 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus lactis subsp. lactis (Streptococcus lactis).;"
L2_013_000G1_scaffold_1060_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10936..11616
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI97604.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Flavodoxins
L2_013_000G1_scaffold_1060_12
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11669..12214
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NK45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB98142.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L2_013_000G1_scaffold_1060_13
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12211..12567
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31583.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L2_013_000G1_scaffold_1060_14
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12575..13075
DNA (501bp) protein (167aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAE4_9CLOT
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EEG31584.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
heptaprenyl diphosphate synthase component I
L2_013_000G1_scaffold_1060_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13402..14877
DNA (1476bp) protein (492aa)
YjeF domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C018_9FIRM
YjeF domain protein {ECO:0000313|EMBL:EDS75508.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
sugar kinase
L2_013_000G1_scaffold_1060_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14914..15669)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C019_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1060_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15747..16103
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C020_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75510.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1060_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16124..17767)
DNA (1644bp) protein (548aa)
Fibronectin-binding protein A domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C021_9FIRM
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:EDS75511.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Fibronectin/fibrinogen-binding protein
L2_013_000G1_scaffold_1060_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17903..18463
DNA (561bp) protein (187aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Guanylate kinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C022_9FIRM
guk; putative guanylate kinase
L2_013_000G1_scaffold_1060_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18492..18902
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C023_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75513.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1060_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18965..19537
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C024_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75514.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
DUF218 domain-containing protein
L2_013_000G1_scaffold_1060_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19555..21795
DNA (2241bp) protein (747aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Primosomal protein N n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C025_9FIRM
priA; primosomal protein
L2_013_000G1_scaffold_1060_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21808..23061
DNA (1254bp) protein (418aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C027_9FIRM
16S rRNA methyltransferase
L2_013_000G1_scaffold_1060_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23063..24091
DNA (1029bp) protein (343aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C028_9FIRM
rlmN; ribosomal RNA large subunit methyltransferase RlmN
L2_013_000G1_scaffold_1060_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24091..24828
DNA (738bp) protein (246aa)
prpC1; phosphorylated protein phosphatase (EC:3.1.3.16)
Protein phosphatase 2C n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C029_9FIRM
Protein phosphatase 2C {ECO:0000313|EMBL:EDS75519.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1060_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24830..26779
DNA (1950bp) protein (650aa)
Kinase domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C030_9FIRM
Kinase domain protein {ECO:0000313|EMBL:EDS75520.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Serine/threonine-protein kinase PrkC
L2_013_000G1_scaffold_1060_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26790..27647
DNA (858bp) protein (286aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C031_9FIRM
ribosome-associated GTPase
L2_013_000G1_scaffold_1060_28
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27640..28281
DNA (642bp) protein (214aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C032_9FIRM
L2_013_000G1_scaffold_1060_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28278..28868
DNA (591bp) protein (197aa)
Thiamine diphosphokinase {ECO:0000313|EMBL:EDS75523.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EDS75523.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Thiamine diphosphokinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C033_9FIRM
thiN; thiamine pyrophosphokinase
L2_013_000G1_scaffold_1060_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28894..29379)
DNA (486bp) protein (162aa)
PTS system, glucose subfamily, IIA component n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C034_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EDS75524.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ptbA; PTS system glucose subfamily transporter subunit IIA
Displaying items 1-30 of 33 in total

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