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L2_013_000G1_scaffold_1425

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_013_000G1_scaffold_1425_1
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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335..781
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G9V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05211.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Helix-turn-helix.
L2_013_000G1_scaffold_1425_2
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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1003..2190
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q8Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27241.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L2_013_000G1_scaffold_1425_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2570..6511)
DNA (3942bp) protein (1314aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T5D5_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97783.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_013_000G1_scaffold_1425_4
unknown

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6991..7236
DNA (246bp) protein (82aa)

This feature has no annotations

L2_013_000G1_scaffold_1425_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7314..8861)
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4B5_9FIRM
L2_013_000G1_scaffold_1425_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8876..10153)
DNA (1278bp) protein (426aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4B4_9FIRM
L2_013_000G1_scaffold_1425_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10511..11371)
DNA (861bp) protein (287aa)
dagK; diacylglycerol kinase DagK (EC:2.7.1.107)
Diacylglycerol kinase catalytic domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4A9_9FIRM
Diacylglycerol kinase catalytic domain protein {ECO:0000313|EMBL:EDS74493.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1425_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11459..11986
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74492.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L2_013_000G1_scaffold_1425_9
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12583..12786)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XCC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06076.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
metal-dependent phosphohydrolase HD sub domain
L2_013_000G1_scaffold_1425_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13063..13566)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35614.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative HD superfamily hydrolase involved in NAD metabolism
L2_013_000G1_scaffold_1425_11
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14245..15333)
DNA (1089bp) protein (363aa)
SH3 domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4A4_9FIRM
SH3 domain protein {ECO:0000313|EMBL:EDS74488.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
endolysin
L2_013_000G1_scaffold_1425_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15503..15877
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4A3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDS74487.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
GntR family transcriptional regulator
L2_013_000G1_scaffold_1425_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15880..16746
DNA (867bp) protein (289aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4A2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS74486.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC transporter
L2_013_000G1_scaffold_1425_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16740..17390
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74485.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1425_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17483..18151
DNA (669bp) protein (223aa)
Response regulator receiver domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4A0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS74484.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_013_000G1_scaffold_1425_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18148..19140
DNA (993bp) protein (331aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C499_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDS74483.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1425_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19236..20003
DNA (768bp) protein (256aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C498_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS74482.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1425_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19993..21999
DNA (2007bp) protein (669aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C497_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDS74481.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_013_000G1_scaffold_1425_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22048..23769)
DNA (1722bp) protein (574aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RN67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17538.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_013_000G1_scaffold_1425_20
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23753..25510)
DNA (1758bp) protein (586aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC transporter family protein n=10 Tax=Clostridium difficile RepID=T2XUH8_CLODI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM94958.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
L2_013_000G1_scaffold_1425_21
unknown

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25730..26005
DNA (276bp) protein (92aa)

This feature has no annotations

L2_013_000G1_scaffold_1425_22
unknown

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25995..26138
DNA (144bp) protein (48aa)

This feature has no annotations

L2_013_000G1_scaffold_1425_23
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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26269..26985
DNA (717bp) protein (239aa)
Nitroreductase family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7E2_9EURY
Nitroreductase family protein
Nitroreductase family protein {ECO:0000313|EMBL:AGN26569.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1.;"
L2_013_000G1_scaffold_1425_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(27118..28206)
DNA (1089bp) protein (363aa)
O-GlcNAcase NagJ {ECO:0000313|EMBL:EDS74480.1}; EC=3.2.1.52 {ECO:0000313|EMBL:EDS74480.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
O-GlcNAcase NagJ n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C496_9FIRM
hyaluronoglucosaminidase
Displaying 24 items

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